Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 SPATA2P1-201ENST00000431223 2055 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 VN2R3P-201ENST00000422626 1412 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AL358913.2-201ENST00000553881 1548 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC007406.5-201ENST00000570140 3170 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 RNU4-21P-201ENST00000362802 126 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 Y_RNA.88-201ENST00000363029 99 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 CREM-213ENST00000374734 711 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC007068.1-201ENST00000396690 844 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC234778.1-201ENST00000399253 370 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC136624.1-201ENST00000400791 413 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 TDGF1P4-201ENST00000401555 520 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 RN7SKP119-201ENST00000410753 273 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC010385.1-201ENST00000412374 256 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 MTND1P21-201ENST00000412991 285 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 UQCRHP2-201ENST00000415651 288 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 USP9YP31-201ENST00000431405 881 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC009263.1-201ENST00000441193 1239 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 MTND1P30-201ENST00000441241 901 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AL512326.1-201ENST00000443050 721 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 FO393419.1-201ENST00000443746 355 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AL590326.1-201ENST00000460857 334 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 RPS12P20-201ENST00000464109 380 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 CREM-231ENST00000479070 939 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC008638.2-201ENST00000503840 715 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC233724.10-201ENST00000510454 409 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 RN7SKP98-201ENST00000517070 156 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 OR5BK1P-201ENST00000550421 823 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 ATP5F1P7-201ENST00000567330 760 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 MIR548S-201ENST00000581352 82 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
SHISA3A0PJX4 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC005518.2-201ENST00000603254 282 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC009220.3-201ENST00000604318 586 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 NDUFA8P1-201ENST00000605525 367 ntBASIC6.5□□□□□ -1.37
SHISA3A0PJX4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms