Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC140479.2-201ENST00000421567 3130 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 GTF2IP4-201ENST00000453092 2054 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 SNORA64.3-201ENST00000365647 134 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 GTF3AP6-201ENST00000432585 986 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC009237.1-201ENST00000442127 744 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 VPS25P1-201ENST00000455691 508 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 RBMY2HP-201ENST00000457961 720 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 RN7SL39P-201ENST00000462264 297 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 OR9A1P-202ENST00000484361 945 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 RNA5SP400-201ENST00000517155 111 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 MYL2-203ENST00000548438 664 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC125494.2-201ENST00000602431 657 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC025857.2-201ENST00000602711 238 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC097641.3-201ENST00000613523 464 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 GAPDHP41-201ENST00000613707 975 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AL445649.1-201ENST00000615941 691 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 MIR6811-201ENST00000620409 58 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 BIN2P1-201ENST00000504996 1530 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AL359976.1-201ENST00000418655 3528 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AL161912.4-201ENST00000623889 2468 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 AC011815.2-201ENST00000618230 2021 ntBASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DRB4X5D2U9 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RN7SKP184-201ENST00000362348 333 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RNU11-6P-201ENST00000391127 133 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 PRELID1P1-201ENST00000403549 660 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AL354766.1-201ENST00000423396 542 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AC092967.1-201ENST00000449016 481 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RN7SL552P-201ENST00000462094 276 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RN7SL369P-201ENST00000477138 299 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 SNRPCP11-201ENST00000492453 205 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 MRPS5P3-201ENST00000515577 166 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AC138517.1-201ENST00000515724 568 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 661 ms