Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 CREM-212ENST00000374728 1933 ntTSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC103591.2-201ENST00000265259 766 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 FUNDC2P3-201ENST00000334716 533 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 MT-TL1-201ENST00000386347 75 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 RNU2-65P-201ENST00000410162 185 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 KRTAP9-11P-201ENST00000431013 525 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 PSPHP1-201ENST00000450062 261 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC114755.1-201ENST00000453101 868 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC013267.1-201ENST00000458227 267 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 MARK2P8-201ENST00000476069 952 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 VPS26AP1-201ENST00000483197 979 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC107956.2-201ENST00000496042 454 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC010342.1-201ENST00000514047 877 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 CR383656.6-201ENST00000550518 394 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC090287.1-201ENST00000578374 291 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC005262.1-201ENST00000588562 362 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AL158151.4-201ENST00000600965 507 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 PART1_1.1-201ENST00000611761 217 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AP002505.2-201ENST00000623585 696 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 OR52B5P-202ENST00000641118 1110 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 MTCO1P23-201ENST00000415223 1526 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC092646.2-201ENST00000431242 2095 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 XRCC6P5-201ENST00000435236 1795 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC110998.1-201ENST00000519029 2053 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AL353807.3-201ENST00000500626 2505 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 OR9M1P-202ENST00000641564 3163 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 ENSAP3-201ENST00000312710 333 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 RNU6-374P-201ENST00000364146 108 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 EEF1GP6-201ENST00000402309 905 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 RPS21P1-201ENST00000434479 247 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 RN7SL815P-201ENST00000470970 290 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 GAPDHP39-201ENST00000481866 979 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 NENFP3-201ENST00000503735 313 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 RBMS2P1-201ENST00000525031 1226 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms