Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC092692.1-201ENST00000623625 2595 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC096921.2-201ENST00000561507 1916 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 RNU1-49P-201ENST00000363468 159 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 RN7SKP187-201ENST00000365536 330 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 RNA5SP198-201ENST00000410376 127 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AL121578.1-201ENST00000428051 892 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 RN7SL168P-201ENST00000463821 279 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC128716.1-201ENST00000475129 166 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 OR7E22P-201ENST00000478335 1035 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC113367.2-201ENST00000505749 160 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 RPA2P3-201ENST00000533268 770 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 OR4A40P-201ENST00000533878 948 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AP001858.2-201ENST00000536213 601 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 MIR3154-201ENST00000577829 84 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 NPIPB1P-202ENST00000588786 828 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC107993.1-201ENST00000591343 684 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC015849.6-201ENST00000605454 474 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AL591167.1-201ENST00000607321 456 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 AC111152.1-202ENST00000635848 339 ntBASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4BQ9Y4P1 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 AC079753.1-201ENST00000623243 3868 ntBASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 HDAC1P2-201ENST00000453661 1398 ntBASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.9□□□□□ -1.47
ATG4BQ9Y4P1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 SNORA43.1-201ENST00000364863 140 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC007562.1-201ENST00000421819 517 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AL354893.1-201ENST00000433735 348 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 BTG3P1-201ENST00000435859 716 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 PPIAP10-201ENST00000438675 458 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC023274.2-201ENST00000445264 521 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC118758.1-202ENST00000454719 225 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AL022319.1-201ENST00000458183 1167 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 RN7SL552P-201ENST00000462094 276 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 RNA5SP473-201ENST00000516402 125 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC092865.1-201ENST00000544395 1023 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 DYNLL1P1-201ENST00000595442 269 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 RPSAP75-201ENST00000605848 301 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC018690.1-201ENST00000608144 626 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 AC022106.1-201ENST00000612834 766 ntBASIC5.89□□□□□ -1.47
ATG4BQ9Y4P1 MIR7109-201ENST00000613748 65 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms