Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 IST1-226ENST00000606369 3583 ntTSL 2 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 RBMX2P2-201ENST00000257020 946 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 SSX6-201ENST00000376932 562 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 SNORA11.5-201ENST00000408163 128 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 SNORA2C-201ENST00000408564 137 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 FAM183DP-201ENST00000421987 399 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 ANXA2P2-201ENST00000435128 1020 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 OSTCP2-201ENST00000437956 444 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC013787.1-201ENST00000460165 307 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 OR4A1P-201ENST00000532342 920 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC091932.1-201ENST00000569381 427 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 MIR5708-201ENST00000579723 85 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC113361.1-201ENST00000606683 543 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC025287.2-201ENST00000621911 668 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC112487.2-201ENST00000637950 304 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 EEF1A1P28-201ENST00000450915 1403 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 BX284613.1-201ENST00000452221 1641 ntBASIC10.47□□□□□ -0.73
PHF8Q9UPP1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 ADAM21P1-201ENST00000529267 2170 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AC009148.1-201ENST00000570148 2693 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 OR51E1-202ENST00000530215 2942 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 Y_RNA.160-201ENST00000363677 92 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 Y_RNA.295-201ENST00000364918 102 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 Y_RNA.573-201ENST00000384763 105 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 SNORD65C-201ENST00000390962 71 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 SRI-202ENST00000394641 653 ntTSL 2 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 COX6A1P3-201ENST00000404167 293 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AL035458.1-201ENST00000433096 585 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AL022324.2-201ENST00000434827 780 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 UBE2V1P3-201ENST00000439651 417 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 DDX39BP2-208ENST00000453923 258 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AC079841.1-201ENST00000481228 950 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 RPL7P24-201ENST00000493052 752 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 RPL23AP80-201ENST00000495605 424 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 snoZ278.1-201ENST00000517059 112 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AC107952.1-201ENST00000524200 376 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 COX4I1P1-201ENST00000554239 509 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 RN7SL426P-201ENST00000579106 295 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 CUX2P1-201ENST00000606426 298 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AC005609.2-201ENST00000623320 592 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC10.46□□□□□ -0.73
PHF8Q9UPP1 LINC01739-205ENST00000641890 573 ntBASIC10.46□□□□□ -0.73
PHF8Q9UPP1 NEPNP-201ENST00000404786 1371 ntBASIC10.46□□□□□ -0.74
PHF8Q9UPP1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PHF8Q9UPP1 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC10.46□□□□□ -0.74
PHF8Q9UPP1 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PHF8Q9UPP1 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.74
PHF8Q9UPP1 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
PHF8Q9UPP1 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms