Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NPIPA1Q9UND3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
NPIPA1Q9UND3 SAGE3P-201ENST00000619800 1635 ntBASIC5.81□□□□□ -1.48
NPIPA1Q9UND3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA1Q9UND3 OLMALINC-203ENST00000641087 3779 ntBASIC5.81□□□□□ -1.48
NPIPA1Q9UND3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
NPIPA1Q9UND3 AC105749.1-201ENST00000631338 2008 ntBASIC5.81□□□□□ -1.48
NPIPA1Q9UND3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA1Q9UND3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC130360.2-201ENST00000533477 1556 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 NEK2P2-201ENST00000438441 1338 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AL353743.3-201ENST00000442109 1468 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 COX6B1P3-201ENST00000312310 260 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 SNORD16-201ENST00000362803 99 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC094019.1-201ENST00000434678 472 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AL355355.1-201ENST00000442900 793 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 MRPS21P8-201ENST00000569196 235 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC090826.1-203ENST00000569235 490 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC092681.3-201ENST00000609463 678 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AC010809.3-201ENST00000621310 641 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 OR7E91P-202ENST00000642062 1198 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 AL157831.2-201ENST00000564681 3095 ntBASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NPIPA1Q9UND3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 LYARP1-201ENST00000436977 1501 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AL353626.3-201ENST00000413399 657 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 NME1P1-201ENST00000420914 382 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC097721.1-201ENST00000427150 1253 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC068228.1-201ENST00000461723 211 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 RN7SL104P-201ENST00000498686 293 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 MTND6P8-201ENST00000503471 522 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC021733.2-201ENST00000518830 497 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AP005639.1-201ENST00000526939 192 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 TRIM51DP-201ENST00000529746 596 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC233702.7-202ENST00000582941 211 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 RN7SL475P-201ENST00000583379 298 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms