Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP001437.1-201ENST00000608783 456 ntBASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 BRAFP1-201ENST00000445336 2703 ntBASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP2Q9UDT6 TTC41P-205ENST00000551270 3963 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 IGLV3-4-201ENST00000432300 244 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 KATNBL1P2-201ENST00000433311 835 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AL451063.1-201ENST00000450164 1133 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC009963.3-201ENST00000458090 486 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 NDUFA5P11-201ENST00000567995 343 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC073389.3-201ENST00000609434 935 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC092681.3-201ENST00000609463 678 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC022106.1-201ENST00000612834 766 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC010998.3-201ENST00000613871 631 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 MIR7159-201ENST00000620587 66 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 AC105235.1-201ENST00000623208 1816 ntBASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CLIP2Q9UDT6 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 COX6B1P3-201ENST00000312310 260 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 RNA5SP350-201ENST00000363298 111 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 RN7SKP144-201ENST00000411108 279 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 RPS10P18-201ENST00000442662 495 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 MORF4-201ENST00000447135 971 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 VN1R38P-201ENST00000450265 887 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 VPS25P1-201ENST00000455691 508 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 RBBP4P1-201ENST00000502424 1276 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 SNORA81.2-201ENST00000516868 170 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 AC024255.1-201ENST00000614376 102 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 AL359742.1-201ENST00000622497 540 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 LYARP1-201ENST00000436977 1501 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 AC110373.1-201ENST00000505994 3505 ntBASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP2Q9UDT6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.34□□□□□ -1.23
CLIP2Q9UDT6 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.34□□□□□ -1.23
CLIP2Q9UDT6 HSPD1P9-201ENST00000420325 1636 ntBASIC7.34□□□□□ -1.23
CLIP2Q9UDT6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.34□□□□□ -1.23
CLIP2Q9UDT6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLIP2Q9UDT6 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLIP2Q9UDT6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms