Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC119403.2-201ENST00000590960 598 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC091167.5-201ENST00000605689 894 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC097641.3-201ENST00000613523 464 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 AL162377.2-201ENST00000624532 337 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 AL357562.1-201ENST00000624911 609 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC073488.3-201ENST00000631611 778 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 MTCO1P28-201ENST00000574177 1528 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 AC005725.1-201ENST00000577346 2607 ntBASIC6.48□□□□□ -1.37
CISHQ9NSE2 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CISHQ9NSE2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.48□□□□□ -1.37
CISHQ9NSE2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 RN7SKP187-201ENST00000365536 330 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 MIR130B-202ENST00000385018 82 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AL451046.1-201ENST00000406097 534 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC245096.1-201ENST00000413104 546 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC007679.3-201ENST00000434035 414 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 AL731534.1-201ENST00000434711 269 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 TRIM60P16-201ENST00000444048 694 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 RBMY2AP-201ENST00000445405 1157 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 RBMY2CP-201ENST00000448575 1157 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 RBMY2DP-202ENST00000448881 1157 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 RBMY2BP-202ENST00000451071 1156 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC019084.1-201ENST00000457337 432 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 CTSLP6-201ENST00000458273 1002 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 RN7SL168P-201ENST00000463821 279 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 OR56A7P-201ENST00000524865 941 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC006512.2-201ENST00000543250 486 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 MIR132-201ENST00000591554 101 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 MIR7109-201ENST00000613748 65 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC073592.6-201ENST00000624271 415 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 AP001052.1-201ENST00000626421 99 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 AC008627.1-201ENST00000517511 1704 ntBASIC6.47□□□□□ -1.37
CISHQ9NSE2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CISHQ9NSE2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CISHQ9NSE2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CISHQ9NSE2 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CISHQ9NSE2 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CISHQ9NSE2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CISHQ9NSE2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.46□□□□□ -1.37
CISHQ9NSE2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.46□□□□□ -1.37
CISHQ9NSE2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CISHQ9NSE2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.46□□□□□ -1.37
CISHQ9NSE2 OR10R3P-201ENST00000361688 942 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CISHQ9NSE2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 RPL6P30-201ENST00000443382 862 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC009963.3-201ENST00000458090 486 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 SLC25A51P1-201ENST00000468432 871 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 AL355032.1-201ENST00000472981 438 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 RPL23AP40-201ENST00000487630 390 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC114728.1-201ENST00000488289 483 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC253576.1-201ENST00000511645 1156 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC011853.1-201ENST00000518911 454 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC008429.4-201ENST00000521201 182 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AP001437.1-201ENST00000608783 456 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms