Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 CASC19-238ENST00000641523 1558 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 RNA5SP122-201ENST00000384457 108 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 MIR323B-201ENST00000385269 82 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AL157702.1-201ENST00000398764 426 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AL035405.1-201ENST00000400795 710 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 NPM1P26-201ENST00000426339 738 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AL645936.1-201ENST00000441979 518 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC010240.2-201ENST00000445363 1205 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 RPL31P20-201ENST00000449593 360 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 OR13C1P-201ENST00000457612 963 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 EIF2S2P5-201ENST00000457635 968 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC009963.3-201ENST00000458090 486 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC021074.2-201ENST00000468434 172 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC094085.1-201ENST00000468914 584 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 RPL23AP64-201ENST00000469465 435 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 PCNAP1-201ENST00000505363 709 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 RNA5SP206-201ENST00000516703 121 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 PRELID3BP3-201ENST00000584963 545 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC034229.4-201ENST00000607861 441 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AP001437.1-201ENST00000608783 456 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AL365181.4-201ENST00000609800 547 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AL136097.3-201ENST00000611097 505 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AP003499.2-201ENST00000624100 483 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AC092725.2-201ENST00000567658 1389 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VTA1Q9NP79 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.3□□□□□ -1.24
VTA1Q9NP79 AL353743.3-201ENST00000442109 1468 ntBASIC7.3□□□□□ -1.24
VTA1Q9NP79 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC022819.1-201ENST00000563495 3910 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC007485.2-201ENST00000623493 1667 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC125238.2-201ENST00000430003 1440 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 MAPK10-383ENST00000642032 3390 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 MIR365B-201ENST00000362317 111 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 SNORD115-48-201ENST00000364764 76 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 GCNT6-201ENST00000379591 934 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC092642.1-201ENST00000392417 425 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AL356057.1-202ENST00000402263 756 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 RN7SKP108-201ENST00000411367 328 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 RNF19BPX-201ENST00000426224 625 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 PNKDP1-201ENST00000435914 430 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 RN7SL643P-201ENST00000471845 291 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 RN7SL561P-201ENST00000488553 281 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC095057.1-201ENST00000507583 168 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC083906.1-201ENST00000509298 406 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms