Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 RNA5SP308-201ENST00000362532 115 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 RNU1-5P-201ENST00000362684 144 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 RN7SKP117-201ENST00000410175 264 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 SOCS5P1-201ENST00000440415 949 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 GTF2IP14-201ENST00000441415 586 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC097486.1-201ENST00000515331 210 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC091304.5-201ENST00000568969 158 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 PPIAP14-201ENST00000577627 496 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC060780.2-201ENST00000589047 198 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC138907.8-201ENST00000623981 2256 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC004076.2-201ENST00000620532 3323 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AL355834.1-201ENST00000556602 3965 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 RN7SKP205-201ENST00000410999 307 ntBASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 RPS7P14-201ENST00000426405 583 ntBASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AC093815.1-201ENST00000508637 280 ntBASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AC090958.1-201ENST00000511122 351 ntBASIC7.4□□□□□ -1.22
UPF2Q9HAU5 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 Y_RNA.710-201ENST00000516975 110 ntBASIC7.4□□□□□ -1.22
UPF2Q9HAU5 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AC089984.3-201ENST00000552838 363 ntBASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AC008555.7-201ENST00000605008 583 ntBASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 AL158152.1-201ENST00000602652 1435 ntBASIC7.4□□□□□ -1.22
UPF2Q9HAU5 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
UPF2Q9HAU5 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.4□□□□□ -1.23
UPF2Q9HAU5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
UPF2Q9HAU5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
UPF2Q9HAU5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
UPF2Q9HAU5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
UPF2Q9HAU5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 AL049634.1-201ENST00000453770 1720 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 AC004023.1-201ENST00000561473 1744 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 RNA5SP375-201ENST00000362975 119 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 AL353133.1-201ENST00000407695 401 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 MYL6P5-201ENST00000412707 459 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 METTL15P3-201ENST00000415522 1221 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 AL356133.1-201ENST00000444762 372 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 ACA64.4-201ENST00000459070 127 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 RN7SL372P-201ENST00000461982 298 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 RN7SL284P-201ENST00000498823 275 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 MINOS1P4-201ENST00000515470 318 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 RN7SKP288-201ENST00000516227 268 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 NPM1P5-201ENST00000557228 838 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 AC005899.7-201ENST00000618199 588 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 GVINP1-202ENST00000531871 7271 ntBASIC7.39□□□□□ -1.23
UPF2Q9HAU5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF2Q9HAU5 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC007998.4-201ENST00000612496 2533 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms