Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-619P-201ENST00000365146 108 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 Y_RNA.401-201ENST00000383965 117 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 TXNP7-201ENST00000406296 293 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC245452.3-201ENST00000413294 162 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 MTCO3P46-201ENST00000425787 232 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC109583.1-201ENST00000432156 268 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 MTND6P18-201ENST00000439477 513 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 RBMY2OP-201ENST00000447105 810 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 ARAFP3-201ENST00000454154 490 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 MTND1P12-201ENST00000455231 147 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 CTSLP6-201ENST00000458273 1002 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC110749.1-201ENST00000462007 357 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 RN7SL302P-201ENST00000475999 300 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC108114.1-201ENST00000477321 437 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 RN7SL573P-201ENST00000485340 276 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 RN7SL28P-201ENST00000488836 298 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 PAX8-211ENST00000497038 816 ntTSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 OR7E28P-201ENST00000505191 975 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC093281.1-201ENST00000514239 549 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC093677.1-201ENST00000514414 678 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AP003122.1-201ENST00000527402 755 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC013828.2-201ENST00000532487 235 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AL121594.2-201ENST00000541658 472 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 CHCHD3P2-201ENST00000550751 639 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC034105.5-201ENST00000564017 314 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC010650.1-201ENST00000567559 494 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 RN7SL353P-201ENST00000579902 252 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 RN7SL155P-201ENST00000581538 263 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AP001017.1-201ENST00000591378 482 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AL355598.1-201ENST00000604169 202 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC090948.1-201ENST00000607464 549 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 OR12D2-206ENST00000623183 1069 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC022743.1-201ENST00000624990 664 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC005618.4-201ENST00000625053 554 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC010223.1-201ENST00000625092 279 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 ANKRD20A21P-202ENST00000623715 3588 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC024560.2-201ENST00000507981 1497 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC7.85□□□□□ -1.15
USB1Q9BQ65 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 AC078795.1-201ENST00000602342 3143 ntBASIC7.85□□□□□ -1.15
USB1Q9BQ65 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USB1Q9BQ65 ZNF587P1-201ENST00000415378 1386 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC108467.2-201ENST00000617640 1597 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC006141.1-201ENST00000581917 2170 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 HSPD1P1-201ENST00000503199 1726 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 USP30-203ENST00000392784 2483 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 Y_RNA.133-201ENST00000363428 110 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 RNU6-331P-201ENST00000384724 107 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 KRT18P12-201ENST00000425245 1273 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC133104.1-201ENST00000429100 218 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 RPL35P8-201ENST00000433284 337 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms