Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX3Q99909 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 SNORA7A-201ENST00000384765 139 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 MIR137-201ENST00000385223 102 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSX3Q99909 RPL9P21-201ENST00000392269 505 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AC019178.1-201ENST00000392337 440 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 UBBP1-201ENST00000392399 473 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 Z82198.3-201ENST00000421145 199 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 CDC42P6-201ENST00000421246 576 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 MGAT2P2-201ENST00000427194 797 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AC013403.1-201ENST00000436954 263 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX3Q99909 NPM1P23-201ENST00000440193 849 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX3Q99909 RPL23AP28-201ENST00000448062 470 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AL121578.2-201ENST00000448797 447 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC090602.1-201ENST00000469695 252 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX3Q99909 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX3Q99909 RN7SKP196-201ENST00000516267 345 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX3Q99909 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX3Q99909 SNRPCP6-201ENST00000528310 210 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 HNRNPRP2-201ENST00000528421 743 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AP006587.5-201ENST00000532033 739 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 AL035410.2-201ENST00000604963 864 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AC211486.4-201ENST00000621495 113 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC243960.7-201ENST00000623532 707 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 SNX18P10-201ENST00000625014 519 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX3Q99909 AC011416.1-201ENST00000514947 1732 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX3Q99909 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSX3Q99909 NEK2P4-201ENST00000425793 1329 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 AL512310.3-201ENST00000547023 1335 ntBASIC5.47□□□□□ -1.53
SSX3Q99909 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX3Q99909 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.47□□□□□ -1.53
SSX3Q99909 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SSX3Q99909 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SSX3Q99909 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SSX3Q99909 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SSX3Q99909 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SSX3Q99909 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.46□□□□□ -1.53
SSX3Q99909 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX3Q99909 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SSX3Q99909 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SSX3Q99909 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 MIR191-201ENST00000384873 92 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 RAB5CP1-201ENST00000395972 580 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 AC096537.2-201ENST00000413707 714 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX3Q99909 VN1R53P-201ENST00000429536 957 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX3Q99909 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX3Q99909 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 RPL12P49-201ENST00000441100 121 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX3Q99909 AL031681.1-201ENST00000443304 400 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 PFN1P11-201ENST00000445829 389 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.46□□□□□ -1.54
SSX3Q99909 MTND6P32-201ENST00000457611 483 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 AC044810.1-201ENST00000480271 711 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 RN7SL382P-201ENST00000482631 282 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 MORF4L2P1-201ENST00000503761 858 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms