Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 AC009120.1-201ENST00000493458 473 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 ST13P12-201ENST00000508958 1094 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 AC022832.1-201ENST00000530718 645 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 GSTP1P1-201ENST00000548078 319 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 AC010245.2-201ENST00000606908 1167 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 AL731566.2-201ENST00000618971 317 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 OR11H2-202ENST00000641517 1085 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
IFT140Q96RY7 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
IFT140Q96RY7 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 RNA5SP478-201ENST00000364657 115 ntBASIC9.87□□□□□ -0.83
IFT140Q96RY7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 AZGP1P2-201ENST00000454506 345 ntBASIC9.87□□□□□ -0.83
IFT140Q96RY7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 TAS2R6P-201ENST00000605022 826 ntBASIC9.87□□□□□ -0.83
IFT140Q96RY7 PPATP2-201ENST00000605635 508 ntBASIC9.87□□□□□ -0.83
IFT140Q96RY7 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
IFT140Q96RY7 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
IFT140Q96RY7 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
IFT140Q96RY7 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC9.87□□□□□ -0.83
IFT140Q96RY7 MFSD8-218ENST00000641186 4448 ntBASIC9.87□□□□□ -0.83
IFT140Q96RY7 AL359091.1-201ENST00000449048 1734 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 RNA5SP211-201ENST00000365516 117 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 RAB28P1-201ENST00000411517 641 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 Z80107.2-201ENST00000445127 392 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 CEACAMP10-202ENST00000495431 496 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 TXNP4-201ENST00000575018 310 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 OR7A11P-201ENST00000597719 953 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 MRE11P1-201ENST00000464884 2127 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.86□□□□□ -0.83
IFT140Q96RY7 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 AC131971.1-201ENST00000332881 1482 ntBASIC9.86□□□□□ -0.83
IFT140Q96RY7 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
IFT140Q96RY7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 RNA5SP350-201ENST00000363298 111 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 MIR141-201ENST00000384975 95 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 AC090142.2-201ENST00000483263 416 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 RN7SL97P-201ENST00000486780 299 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 RBM22P12-201ENST00000567098 1255 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 AC100827.5-201ENST00000615883 426 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
IFT140Q96RY7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
IFT140Q96RY7 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms