Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 RNU11-6P-201ENST00000391127 133 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 YWHAZP6-201ENST00000399764 738 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 RN7SKP161-201ENST00000411110 305 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 IGLV3-4-201ENST00000432300 244 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AL355355.1-201ENST00000442900 793 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 RANP2-201ENST00000456833 229 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 RPL17P2-201ENST00000491913 451 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 AC095052.1-201ENST00000509955 863 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 SNX18P25-201ENST00000510539 758 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 OR4A6P-201ENST00000534364 970 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 AP001858.2-201ENST00000536213 601 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AC125494.2-201ENST00000602431 657 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 AC024589.2-201ENST00000605642 1294 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 AC006924.1-201ENST00000610750 559 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 uc_338.31-201ENST00000615595 186 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 AL109924.4-201ENST00000623089 670 ntBASIC6.22□□□□□ -1.41
VPS35Q96QK1 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.21□□□□□ -1.41
VPS35Q96QK1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
VPS35Q96QK1 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
VPS35Q96QK1 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VPS35Q96QK1 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
VPS35Q96QK1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
VPS35Q96QK1 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS35Q96QK1 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS35Q96QK1 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 AL445238.1-204ENST00000400311 463 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 AL035422.1-201ENST00000414193 397 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 GAPDHP59-201ENST00000435908 267 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 AL133351.3-201ENST00000454998 193 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 SNRPCP3-201ENST00000474888 476 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 AC091874.2-201ENST00000505889 720 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 RNU6-964P-201ENST00000516524 69 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 NPIPB14P-203ENST00000532298 987 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 RPA2P3-201ENST00000533268 770 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 OR1E3-201ENST00000575608 948 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 AC022726.2-201ENST00000634673 547 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 AC011815.2-201ENST00000618230 2021 ntBASIC6.21□□□□□ -1.42
VPS35Q96QK1 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VPS35Q96QK1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VPS35Q96QK1 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS35Q96QK1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS35Q96QK1 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 OR11H13P-201ENST00000359695 979 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 RNU1-49P-201ENST00000363468 159 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 MIR433-201ENST00000384837 93 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 RBBP4P5-201ENST00000398583 1266 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 AC092865.3-201ENST00000425390 1026 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 RPL34P27-201ENST00000428810 349 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 AC010086.1-201ENST00000437359 1052 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 PPIAP10-201ENST00000438675 458 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 AL590004.3-202ENST00000445883 451 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 HIGD1AP16-201ENST00000450986 258 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AC112484.3-201ENST00000505910 329 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms