Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CCDC7Q96M83 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CCDC7Q96M83 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 MIR130B-202ENST00000385018 82 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 RN7SKP151-201ENST00000410230 316 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 RPL12P12-201ENST00000424633 501 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 CDY8P-201ENST00000428380 1279 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 CDY20P-201ENST00000447528 1279 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 SLC25A51P1-201ENST00000468432 871 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 AC008429.4-201ENST00000521201 182 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 AC244502.2-201ENST00000543361 851 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 AC079414.3-201ENST00000612986 1090 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 CIR1P2-201ENST00000514821 1342 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 AL359091.1-201ENST00000449048 1734 ntBASIC8.55□□□□□ -1.04
CCDC7Q96M83 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC7Q96M83 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC7Q96M83 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC7Q96M83 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC7Q96M83 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC7Q96M83 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC7Q96M83 AC009831.5-201ENST00000624000 3189 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC7Q96M83 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 PTCD2P2-201ENST00000415579 1095 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 MTND6P12-201ENST00000428247 522 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 AC007998.1-201ENST00000474156 672 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 AC021269.1-201ENST00000526860 705 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC7Q96M83 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC7Q96M83 AC004890.3-201ENST00000605566 1095 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 AC116667.2-201ENST00000641075 823 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 AC022325.1-201ENST00000502748 2199 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 AC005225.5-201ENST00000623547 2225 ntBASIC8.54□□□□□ -1.04
CCDC7Q96M83 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC7Q96M83 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CCDC7Q96M83 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CCDC7Q96M83 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC119674.1-202ENST00000641333 1860 ntBASIC8.53□□□□□ -1.04
CCDC7Q96M83 RNA5SP284-201ENST00000384547 118 ntBASIC8.53□□□□□ -1.04
CCDC7Q96M83 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AL158068.1-201ENST00000506116 616 ntBASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC090958.1-201ENST00000511122 351 ntBASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 RNA5SP340-201ENST00000517132 107 ntBASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC022826.1-201ENST00000519383 805 ntBASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
CCDC7Q96M83 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms