Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AL353898.3-201ENST00000624679 1755 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AL357556.1-201ENST00000421884 1388 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC087045.3-201ENST00000623046 2468 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AL139327.1-201ENST00000382988 348 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 SNORA70I-201ENST00000384544 135 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC104651.1-201ENST00000427559 735 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 PSMD8P1-201ENST00000436275 769 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 LARP1BP3-201ENST00000437229 869 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC005517.1-201ENST00000452091 489 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC063955.1-201ENST00000462872 685 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 RN7SL791P-201ENST00000467868 295 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 RPL5P33-201ENST00000487833 905 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 RN7SL388P-201ENST00000498736 339 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 MTND3P22-201ENST00000510932 243 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC107952.1-201ENST00000524200 376 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC131935.1-201ENST00000524621 333 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 RBMS2P1-201ENST00000525031 1226 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC061975.3-201ENST00000583209 244 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 VN1R82P-201ENST00000601481 356 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 HMGB1P51-201ENST00000605166 638 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC016405.2-201ENST00000607393 312 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC009779.8-202ENST00000607990 932 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC007014.2-201ENST00000615581 479 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC243830.2-201ENST00000618067 630 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 AC051619.3-201ENST00000560646 2426 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 MFSD8-218ENST00000641186 4448 ntBASIC8.76□□□□□ -1.01
TRIM47Q96LD4 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM47Q96LD4 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC025040.2-201ENST00000558657 1852 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 RNU4-92P-201ENST00000363783 136 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 ATP5F1P3-201ENST00000397213 657 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AL021331.1-201ENST00000402817 582 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 OR2W4P-201ENST00000406496 926 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms