Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL591926.1-201ENST00000620542 217 ntBASIC7.75□□□□□ -1.17
DDX11Q96FC9 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.75□□□□□ -1.17
DDX11Q96FC9 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
DDX11Q96FC9 OLMALINC-203ENST00000641087 3779 ntBASIC7.75□□□□□ -1.17
DDX11Q96FC9 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.75□□□□□ -1.17
DDX11Q96FC9 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
DDX11Q96FC9 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DDX11Q96FC9 AC006213.6-201ENST00000623722 4179 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AL359694.2-201ENST00000567753 1615 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AP003486.1-201ENST00000525716 3994 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 CASC19-228ENST00000641414 1684 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 MTND4P13-201ENST00000402078 1023 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 UBE2V1P15-201ENST00000407776 448 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 RN7SKP86-201ENST00000410454 332 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 RN7SKP296-201ENST00000411185 341 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 RPS21P8-201ENST00000413365 247 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 OR2X1P-201ENST00000421144 687 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AL139415.1-201ENST00000424862 352 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC092106.2-201ENST00000436597 487 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AL691517.1-201ENST00000440833 1235 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC097359.1-201ENST00000447946 463 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC022415.1-202ENST00000486612 523 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 RPL37P23-201ENST00000492641 294 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 MTND6P8-201ENST00000503471 522 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC073581.1-201ENST00000519036 575 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 IGLV3-6-201ENST00000523937 250 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC009729.1-201ENST00000548873 1133 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC087888.1-201ENST00000550884 1254 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC016180.1-201ENST00000567945 403 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC005412.1-201ENST00000580812 1049 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC025165.5-201ENST00000602802 578 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC091133.5-201ENST00000603088 301 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 PPATP2-201ENST00000605635 508 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC009974.1-201ENST00000608881 455 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 AC093783.1-201ENST00000612976 329 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AL356863.1-201ENST00000623378 1080 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 AL035425.4-201ENST00000624509 1063 ntBASIC7.74□□□□□ -1.17
DDX11Q96FC9 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.74□□□□□ -1.17
DDX11Q96FC9 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DDX11Q96FC9 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
DDX11Q96FC9 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
DDX11Q96FC9 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 RNU1-65P-201ENST00000363919 148 ntBASIC7.73□□□□□ -1.17
DDX11Q96FC9 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 RN7SKP129-201ENST00000410288 299 ntBASIC7.73□□□□□ -1.17
DDX11Q96FC9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 COL11A2P1-205ENST00000441798 676 ntBASIC7.73□□□□□ -1.17
DDX11Q96FC9 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 RPL26P30-201ENST00000453533 435 ntBASIC7.73□□□□□ -1.17
DDX11Q96FC9 MTATP6P14-201ENST00000455189 673 ntBASIC7.73□□□□□ -1.17
DDX11Q96FC9 AC104339.1-201ENST00000465478 348 ntBASIC7.73□□□□□ -1.17
DDX11Q96FC9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 NPM1P27-201ENST00000502784 830 ntBASIC7.73□□□□□ -1.17
DDX11Q96FC9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC7.73□□□□□ -1.17
DDX11Q96FC9 AL390198.2-201ENST00000510553 222 ntBASIC7.73□□□□□ -1.17
DDX11Q96FC9 AC034244.2-201ENST00000514668 858 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms