Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LSM3P4-201ENST00000502948 309 ntBASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 AC108103.1-201ENST00000511286 446 ntBASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 AL135999.3-201ENST00000610501 812 ntBASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 AC079776.5-201ENST00000641920 211 ntBASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 TMA16P2-201ENST00000413187 601 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 SDC4P-201ENST00000453285 601 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 MTND6P8-201ENST00000503471 522 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC108043.1-201ENST00000512696 574 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC004232.2-201ENST00000574245 821 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC124916.2-201ENST00000604416 224 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC073389.3-201ENST00000609434 935 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC129915.3-201ENST00000634128 948 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 RNU11-6P-201ENST00000391127 133 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC079355.1-201ENST00000421770 223 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 RPS4XP14-201ENST00000493072 781 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 MIR4701-201ENST00000583094 63 ntBASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SHROOM3Q8TF72 AC022325.1-201ENST00000502748 2199 ntBASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 OR9K1P-201ENST00000326513 941 ntBASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 SNORA58B-201ENST00000364259 136 ntBASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 DNAJC19P5-201ENST00000443295 316 ntBASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 NXT1P1-201ENST00000458481 316 ntBASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 NATP-201ENST00000523491 878 ntBASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC068768.2-201ENST00000602352 343 ntBASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AL683813.2-201ENST00000605245 502 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms