Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC096708.2-201ENST00000577676 512 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC073114.1-201ENST00000612027 490 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AL121583.1-201ENST00000612444 682 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AL356121.2-201ENST00000624715 780 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC023818.2-201ENST00000623817 2304 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 TTC3P1-201ENST00000399586 6081 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC011477.1-204ENST00000623416 1325 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 OR6M2P-202ENST00000641780 2063 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC013268.3-201ENST00000262716 2324 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 SNORD113-6-201ENST00000363345 75 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 SNORA27.3-201ENST00000364937 134 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 RNU6-152P-201ENST00000384037 107 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AL390774.1-201ENST00000411924 246 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 MTND1P2-201ENST00000430604 821 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AL354893.1-201ENST00000433735 348 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 DNAJA1P6-201ENST00000437347 354 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 RPS10P14-201ENST00000440748 502 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC004865.1-201ENST00000442276 1003 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC093325.1-201ENST00000508378 326 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 MIR4428-201ENST00000584884 73 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC022001.1-201ENST00000605193 268 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AP002802.2-201ENST00000605877 235 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC019131.2-201ENST00000609071 870 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC093673.2-201ENST00000609674 331 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC072046.2-201ENST00000618366 268 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 FO082842.1-201ENST00000423552 1370 ntBASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NEDD1Q8NHV4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AL512353.3-201ENST00000417517 1326 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 EIF3EP1-201ENST00000433978 1316 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms