Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TPM3P3-201ENST00000521343 354 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AC141002.1-201ENST00000607025 279 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 MIR6774-201ENST00000614651 70 ntBASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDKL3Q8IVW4 ZNF101P1-201ENST00000435701 1720 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC024587.1-201ENST00000505925 2157 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AL365220.1-201ENST00000432923 399 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC013403.1-201ENST00000436954 263 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC090958.1-201ENST00000511122 351 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC138517.1-201ENST00000515724 568 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 RN7SL261P-201ENST00000613441 282 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 IMMTP1-201ENST00000435590 2219 ntBASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDKL3Q8IVW4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 LINC01613-201ENST00000561476 2780 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC016583.1-201ENST00000624221 2431 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC034229.2-201ENST00000566945 2508 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 MAPK10-261ENST00000641050 3109 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 MIR551B-201ENST00000384984 96 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 RPS7P8-201ENST00000418311 581 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC005632.2-201ENST00000564271 828 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AP001823.1-201ENST00000604056 1003 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC012368.3-201ENST00000604190 219 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC011891.2-201ENST00000604949 397 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AKAP17BP-201ENST00000431706 2719 ntBASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms