Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 RN7SKP250-201ENST00000363924 321 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AL445238.1-204ENST00000400311 463 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 VIM2P-201ENST00000402383 1294 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 RNU2-18P-201ENST00000411224 162 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 RN7SKP17-201ENST00000411242 351 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AC115223.1-201ENST00000466377 870 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 RN7SL649P-201ENST00000496974 275 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 GUSBP9-201ENST00000510138 584 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 NPM1P42-201ENST00000560329 862 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AC025283.1-201ENST00000572039 734 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 MIR132-201ENST00000591554 101 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AC012368.3-201ENST00000604190 219 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AL596275.2-207ENST00000641188 675 ntBASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CRLF3Q8IUI8 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AP001157.1-201ENST00000550837 2339 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 MRPS6P2-201ENST00000381143 370 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 RN7SKP281-201ENST00000410472 352 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL354707.3-201ENST00000427308 331 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 IGLV3-4-201ENST00000432300 244 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 MED28P4-201ENST00000433137 572 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL731534.1-201ENST00000434711 269 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL645939.3-201ENST00000435408 225 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC093870.1-201ENST00000506837 213 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC026956.1-201ENST00000558741 396 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC027229.1-201ENST00000583887 253 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 WBP1LP12-201ENST00000604449 331 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC114477.1-201ENST00000605097 605 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AL031658.2-201ENST00000616850 651 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 MIR7159-201ENST00000620587 66 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 AC000095.2-202ENST00000637415 154 ntBASIC6.15□□□□□ -1.42
CRLF3Q8IUI8 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 AL353743.3-201ENST00000442109 1468 ntBASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 AC090181.3-201ENST00000624777 1514 ntBASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CRLF3Q8IUI8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CRLF3Q8IUI8 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.14□□□□□ -1.43
CRLF3Q8IUI8 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms