Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 PVT1-214ENST00000522875 922 ntTSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 TOMM20P1-201ENST00000534518 427 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 RPL3P13-201ENST00000550415 216 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC133552.4-201ENST00000576103 676 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 MIR4310-201ENST00000582950 57 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC004805.3-201ENST00000603178 310 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 AL445647.2-201ENST00000615170 130 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 MIR6721-201ENST00000617181 87 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 AP001052.1-201ENST00000626421 99 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC068769.1-201ENST00000474767 2426 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC079949.2-201ENST00000617117 2933 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 PARP4P1-201ENST00000435945 2337 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC105749.1-201ENST00000631338 2008 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 RPL11P4-201ENST00000332269 436 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 RN7SKP237-201ENST00000364663 301 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 MRPS6P2-201ENST00000381143 370 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 RBBP4P5-201ENST00000398583 1266 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 MIR1282-201ENST00000408865 101 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 RN7SKP271-201ENST00000410528 320 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 VN1R20P-201ENST00000425215 966 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 RPL34P27-201ENST00000428810 349 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 COX4I1P2-201ENST00000447446 547 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 SULT1D1P-201ENST00000458020 882 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 RN7SL552P-201ENST00000462094 276 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 CR383656.1-201ENST00000484916 377 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC018797.1-201ENST00000510791 255 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 RN7SKP67-201ENST00000515905 235 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC008429.2-201ENST00000523057 864 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC005363.1-201ENST00000530779 351 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 RPL41P2-201ENST00000544920 409 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AP000619.2-201ENST00000546014 969 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AL078601.3-201ENST00000573303 535 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 OR1E3-201ENST00000575608 948 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC134669.1-201ENST00000581275 672 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AL139041.1-201ENST00000605480 610 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC091768.1-201ENST00000609258 930 ntBASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCXQ7RTU7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.18□□□□□ -1.74
SCXQ7RTU7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms