Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 AC106872.5-201ENST00000508856 1416 ntBASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 SHQ1P1-201ENST00000437111 1544 ntBASIC6.15□□□□□ -1.43
LYSMD4Q5XG99 AC139426.3-201ENST00000605648 2059 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 OR4G1P-202ENST00000641173 1788 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 TRAV35-201ENST00000390462 330 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC245060.4-201ENST00000413293 1121 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 BMS1P13-201ENST00000417301 885 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 TUBB4BP6-201ENST00000437576 479 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC064862.4-201ENST00000442180 334 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 BMS1P10-201ENST00000443754 1120 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 OR4A13P-201ENST00000529316 942 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 COX6CP7-201ENST00000597056 208 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 RNA5SP440-201ENST00000612665 119 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC132825.8-201ENST00000640783 297 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC138627.1-204ENST00000641894 765 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 NEK2P2-201ENST00000438441 1338 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AC010624.4-201ENST00000597606 1351 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 AL596244.1-201ENST00000567068 3779 ntBASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
LYSMD4Q5XG99 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 MIR143-201ENST00000385300 106 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 RPS3AP2-201ENST00000407190 754 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 U3.43-201ENST00000410734 213 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 RN7SKP293-201ENST00000411389 296 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 BX284632.2-201ENST00000421091 399 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC245884.2-201ENST00000426257 404 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 BX119321.1-201ENST00000428912 797 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 VN1R110P-201ENST00000438988 971 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AL512605.1-202ENST00000441919 381 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC016908.1-201ENST00000442571 1219 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AL359955.2-201ENST00000445380 353 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 ATP5LP3-201ENST00000514223 304 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC009120.3-201ENST00000563335 499 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms