Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC9.79□□□□□ -0.84
SNAPC4Q5SXM2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SNAPC4Q5SXM2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.79□□□□□ -0.84
SNAPC4Q5SXM2 AC004825.1-201ENST00000555068 586 ntBASIC9.79□□□□□ -0.84
SNAPC4Q5SXM2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC9.79□□□□□ -0.84
SNAPC4Q5SXM2 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC9.79□□□□□ -0.84
SNAPC4Q5SXM2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC9.79□□□□□ -0.84
SNAPC4Q5SXM2 OR11H2-202ENST00000641517 1085 ntBASIC9.79□□□□□ -0.84
SNAPC4Q5SXM2 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AL136981.1-203ENST00000451452 3844 ntBASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 CREM-217ENST00000439705 2306 ntTSL 5 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 EEF1A1P24-201ENST00000451469 1378 ntBASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 RNU11-6P-201ENST00000391127 133 ntBASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 RN7SKP213-201ENST00000410746 298 ntBASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AL139415.1-201ENST00000424862 352 ntBASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 FRG2FP-204ENST00000453982 852 ntBASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SNAPC4Q5SXM2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SNAPC4Q5SXM2 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SNAPC4Q5SXM2 AC011815.2-201ENST00000618230 2021 ntBASIC9.77□□□□□ -0.84
SNAPC4Q5SXM2 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC9.77□□□□□ -0.84
SNAPC4Q5SXM2 AC079753.1-201ENST00000623243 3868 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 CTNNA1P1-201ENST00000515849 2728 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 AC007842.1-201ENST00000597336 2039 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 DPY19L2P2-203ENST00000435536 1858 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 MIR433-201ENST00000384837 93 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 RN7SKP279-201ENST00000411383 298 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 EIF1P7-201ENST00000487533 337 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 AC008115.3-201ENST00000614874 549 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 MIR6837-201ENST00000620884 64 ntBASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC9.77□□□□□ -0.85
SNAPC4Q5SXM2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 HDAC1P2-201ENST00000453661 1398 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 MROH3P-201ENST00000435735 2676 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 MIR223-201ENST00000385204 110 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 AC005297.1-201ENST00000444765 862 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 AC079841.1-201ENST00000481228 950 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 RPL15P21-201ENST00000495592 567 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 AC021146.10-201ENST00000515628 706 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 AL121612.2-201ENST00000612261 482 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 AC012254.5-201ENST00000623573 478 ntBASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms