Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.69□□□□□ -1.66
CCL20P78556 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CCL20P78556 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.69□□□□□ -1.66
CCL20P78556 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CCL20P78556 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.69□□□□□ -1.66
CCL20P78556 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCL20P78556 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CCL20P78556 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 AC121334.1-201ENST00000396414 802 ntBASIC4.69□□□□□ -1.66
CCL20P78556 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.69□□□□□ -1.66
CCL20P78556 RN7SKP279-201ENST00000411383 298 ntBASIC4.69□□□□□ -1.66
CCL20P78556 SNX18P13-201ENST00000412442 529 ntBASIC4.69□□□□□ -1.66
CCL20P78556 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.69□□□□□ -1.66
CCL20P78556 AC000089.1-201ENST00000424559 801 ntBASIC4.69□□□□□ -1.66
CCL20P78556 AL136231.1-201ENST00000429407 730 ntBASIC4.69□□□□□ -1.66
CCL20P78556 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.69□□□□□ -1.66
CCL20P78556 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.69□□□□□ -1.66
CCL20P78556 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.69□□□□□ -1.66
CCL20P78556 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.69□□□□□ -1.66
CCL20P78556 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.69□□□□□ -1.66
CCL20P78556 AP003041.2-201ENST00000525666 1180 ntBASIC4.69□□□□□ -1.66
CCL20P78556 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.69□□□□□ -1.66
CCL20P78556 BMS1P16-201ENST00000556075 1147 ntBASIC4.69□□□□□ -1.66
CCL20P78556 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.69□□□□□ -1.66
CCL20P78556 AC092718.4-201ENST00000566639 716 ntBASIC4.69□□□□□ -1.66
CCL20P78556 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.69□□□□□ -1.66
CCL20P78556 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC4.69□□□□□ -1.66
CCL20P78556 uc_338.26-201ENST00000612659 160 ntBASIC4.69□□□□□ -1.66
CCL20P78556 AL132821.1-201ENST00000616029 394 ntBASIC4.69□□□□□ -1.66
CCL20P78556 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC4.69□□□□□ -1.66
CCL20P78556 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.69□□□□□ -1.66
CCL20P78556 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 AC003985.2-201ENST00000562268 1669 ntBASIC4.69□□□□□ -1.66
CCL20P78556 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.69□□□□□ -1.66
CCL20P78556 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCL20P78556 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.68□□□□□ -1.66
CCL20P78556 AC126474.2-201ENST00000623268 1750 ntBASIC4.68□□□□□ -1.66
CCL20P78556 AC092376.2-201ENST00000622621 4116 ntBASIC4.68□□□□□ -1.66
CCL20P78556 AC007938.2-201ENST00000604666 2634 ntBASIC4.68□□□□□ -1.66
CCL20P78556 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CCL20P78556 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
CCL20P78556 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCL20P78556 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCL20P78556 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.68□□□□□ -1.66
CCL20P78556 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCL20P78556 RNA5SP140-201ENST00000364524 92 ntBASIC4.68□□□□□ -1.66
CCL20P78556 RNA5SP355-201ENST00000365317 135 ntBASIC4.68□□□□□ -1.66
CCL20P78556 MIR614-201ENST00000385082 90 ntBASIC4.68□□□□□ -1.66
CCL20P78556 HIST1H2BPS2-201ENST00000402707 340 ntBASIC4.68□□□□□ -1.66
CCL20P78556 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 MYL6P5-201ENST00000412707 459 ntBASIC4.68□□□□□ -1.66
CCL20P78556 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 HYALP1-201ENST00000417674 1279 ntBASIC4.68□□□□□ -1.66
CCL20P78556 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCL20P78556 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC4.68□□□□□ -1.66
CCL20P78556 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 AC083862.1-201ENST00000427378 1242 ntBASIC4.68□□□□□ -1.66
CCL20P78556 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCL20P78556 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.68□□□□□ -1.66
CCL20P78556 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCL20P78556 GAPDHP14-201ENST00000450472 937 ntBASIC4.68□□□□□ -1.66
CCL20P78556 SDC4P-201ENST00000453285 601 ntBASIC4.68□□□□□ -1.66
CCL20P78556 AC099670.1-201ENST00000455141 783 ntBASIC4.68□□□□□ -1.66
CCL20P78556 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC4.68□□□□□ -1.66
CCL20P78556 RN7SL836P-201ENST00000476140 296 ntBASIC4.68□□□□□ -1.66
CCL20P78556 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCL20P78556 SNX18P24-201ENST00000505249 671 ntBASIC4.68□□□□□ -1.66
CCL20P78556 Z99943.2-201ENST00000507585 266 ntBASIC4.68□□□□□ -1.66
CCL20P78556 B3GNTL1P1-201ENST00000509174 289 ntBASIC4.68□□□□□ -1.66
CCL20P78556 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.68□□□□□ -1.66
CCL20P78556 GAPDHP62-201ENST00000515313 990 ntBASIC4.68□□□□□ -1.66
CCL20P78556 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.68□□□□□ -1.66
CCL20P78556 AP001858.2-201ENST00000536213 601 ntBASIC4.68□□□□□ -1.66
CCL20P78556 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.68□□□□□ -1.66
CCL20P78556 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.68□□□□□ -1.66
CCL20P78556 TXNP4-201ENST00000575018 310 ntBASIC4.68□□□□□ -1.66
CCL20P78556 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC4.68□□□□□ -1.66
CCL20P78556 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC4.68□□□□□ -1.66
CCL20P78556 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.68□□□□□ -1.66
CCL20P78556 AC004805.3-201ENST00000603178 310 ntBASIC4.68□□□□□ -1.66
CCL20P78556 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCL20P78556 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.68□□□□□ -1.66
CCL20P78556 AC138965.3-201ENST00000623875 498 ntBASIC4.68□□□□□ -1.66
CCL20P78556 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms