Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 AL606834.3-201ENST00000602615 496 ntBASIC6.16□□□□□ -1.42
NKX6-1P78426 AL357094.1-201ENST00000603845 844 ntBASIC6.16□□□□□ -1.42
NKX6-1P78426 MIR7109-201ENST00000613748 65 ntBASIC6.16□□□□□ -1.42
NKX6-1P78426 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NKX6-1P78426 KARSP2-201ENST00000415696 1639 ntBASIC6.16□□□□□ -1.42
NKX6-1P78426 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.16□□□□□ -1.42
NKX6-1P78426 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX6-1P78426 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX6-1P78426 MTND5P23-201ENST00000430812 1655 ntBASIC6.16□□□□□ -1.42
NKX6-1P78426 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX6-1P78426 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NKX6-1P78426 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.16□□□□□ -1.42
NKX6-1P78426 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 AC010329.1-201ENST00000593903 8328 ntBASIC6.16□□□□□ -1.42
NKX6-1P78426 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NKX6-1P78426 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.16□□□□□ -1.42
NKX6-1P78426 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NKX6-1P78426 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX6-1P78426 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NKX6-1P78426 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NKX6-1P78426 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 AL669831.5-218ENST00000591702 1873 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX6-1P78426 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC007342.7-201ENST00000624610 2337 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC012078.1-201ENST00000405035 1646 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC245100.2-201ENST00000454544 1679 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NKX6-1P78426 FAM204BP-201ENST00000369171 701 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AL672167.2-201ENST00000377164 879 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 SNORD94-201ENST00000386037 137 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NKX6-1P78426 ZNF602P-201ENST00000405929 924 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 VDAC1P10-201ENST00000416715 891 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
NKX6-1P78426 UQCRHP1-204ENST00000424609 274 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 HMGB3P5-201ENST00000428894 612 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 NDUFA5P10-201ENST00000432147 357 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 FTLP17-201ENST00000432567 525 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX6-1P78426 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 RPL12P11-201ENST00000439970 501 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AL355355.1-201ENST00000442900 793 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 BX005266.3-201ENST00000443013 1075 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX6-1P78426 RPS18P1-201ENST00000447840 458 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AL445991.1-201ENST00000450381 475 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 CYCSP42-201ENST00000450823 238 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX6-1P78426 RPL21P18-201ENST00000469899 480 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.15□□□□□ -1.42
NKX6-1P78426 RPS3AP6-201ENST00000484430 795 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 RPL5P33-201ENST00000487833 905 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 HMGB1P38-201ENST00000490557 577 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 RN7SL143P-201ENST00000496780 297 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AC146944.3-201ENST00000509969 371 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 PGAM4P2-201ENST00000512491 721 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AP003033.2-201ENST00000528901 805 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC069240.2-201ENST00000550242 609 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC096708.2-201ENST00000577676 512 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AC099785.1-201ENST00000605697 437 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AC025175.1-201ENST00000606482 759 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AL359091.2-201ENST00000609303 556 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 AC006946.3-201ENST00000609791 756 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms