Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC116562.1-201ENST00000485355 781 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 RN7SL187P-201ENST00000495587 303 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 SUMO1P1-201ENST00000497904 306 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC113420.1-201ENST00000507903 571 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 AC133963.2-201ENST00000513686 578 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 RN7SKP11-201ENST00000517018 287 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC107952.1-201ENST00000524200 376 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 CASP1P2-201ENST00000526830 1258 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 OR5BK1P-201ENST00000550421 823 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 FXNP1-201ENST00000555153 337 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 RN7SL689P-201ENST00000577215 297 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 Z82195.1-201ENST00000604558 398 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC080013.6-201ENST00000606185 215 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC005021.1-201ENST00000608730 355 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 RMST_5.1-201ENST00000618704 126 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC004943.3-201ENST00000624116 600 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC139792.2-201ENST00000624218 587 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC079416.3-201ENST00000624479 549 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC092821.3-202ENST00000641304 2767 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC018717.1-201ENST00000457712 1505 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 LPAL2-203ENST00000454031 2498 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLRN1P58418 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 AL136531.3-201ENST00000624378 3658 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 OR10D1P-201ENST00000355343 936 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLRN1P58418 RNU6-1005P-201ENST00000384519 107 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLRN1P58418 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLRN1P58418 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 AP002784.2-201ENST00000397300 549 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 CYCSP17-201ENST00000407870 315 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 RN7SKP137-201ENST00000411074 307 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 YWHAZP5-201ENST00000419975 730 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 FDPSP6-201ENST00000425091 512 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 OR52S1P-201ENST00000427016 937 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 TXNL1P1-201ENST00000429528 554 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 SNRPFP2-201ENST00000440710 251 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 ST13P21-201ENST00000453250 1098 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AL096803.1-201ENST00000456921 1021 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 NMNAT1P3-201ENST00000457517 888 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 RN7SL492P-201ENST00000460700 295 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.09□□□□□ -1.43
CLRN1P58418 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC134050.1-201ENST00000495088 933 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC147055.3-201ENST00000510547 851 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms