Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH12P55289 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH12P55289 AC090616.1-201ENST00000583895 447 ntBASIC5.88□□□□□ -1.47
CDH12P55289 OR7E19P-202ENST00000589942 844 ntBASIC5.88□□□□□ -1.47
CDH12P55289 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.88□□□□□ -1.47
CDH12P55289 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH12P55289 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.88□□□□□ -1.47
CDH12P55289 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
CDH12P55289 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CDH12P55289 ZNF402P-201ENST00000404435 3100 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH12P55289 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH12P55289 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH12P55289 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH12P55289 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH12P55289 RNU1-59P-201ENST00000364829 162 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AC245036.1-201ENST00000391727 309 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AC019178.1-201ENST00000392337 440 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AL391419.1-201ENST00000398901 1275 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AL589655.1-201ENST00000405398 482 ntBASIC5.87□□□□□ -1.47
CDH12P55289 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.87□□□□□ -1.47
CDH12P55289 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH12P55289 AC013268.2-201ENST00000420753 337 ntBASIC5.87□□□□□ -1.47
CDH12P55289 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH12P55289 AC092646.1-201ENST00000427142 901 ntBASIC5.87□□□□□ -1.47
CDH12P55289 RPL34P27-201ENST00000428810 349 ntBASIC5.87□□□□□ -1.47
CDH12P55289 VN1R53P-201ENST00000429536 957 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH12P55289 SCAND3P1-201ENST00000439854 1060 ntBASIC5.87□□□□□ -1.47
CDH12P55289 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH12P55289 SLAMF6P1-201ENST00000451067 602 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AP000547.1-201ENST00000454360 617 ntBASIC5.87□□□□□ -1.47
CDH12P55289 EIF3LP2-201ENST00000457262 807 ntBASIC5.87□□□□□ -1.47
CDH12P55289 TREML3P-201ENST00000457327 501 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 AL355032.1-201ENST00000472981 438 ntBASIC5.87□□□□□ -1.47
CDH12P55289 TRBV8-1-201ENST00000481590 279 ntBASIC5.87□□□□□ -1.47
CDH12P55289 RN7SL655P-201ENST00000486087 298 ntBASIC5.87□□□□□ -1.47
CDH12P55289 RN7SL350P-201ENST00000492591 299 ntBASIC5.87□□□□□ -1.47
CDH12P55289 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH12P55289 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH12P55289 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH12P55289 COX6B1P4-201ENST00000519826 484 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH12P55289 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH12P55289 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH12P55289 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH12P55289 AC092718.4-201ENST00000566639 716 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AC090651.1-201ENST00000567865 634 ntBASIC5.87□□□□□ -1.47
CDH12P55289 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 RN7SL657P-201ENST00000582431 293 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH12P55289 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH12P55289 BNIP3P35-201ENST00000604530 490 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AL078624.2-201ENST00000605063 554 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AC114477.1-201ENST00000605097 605 ntBASIC5.87□□□□□ -1.47
CDH12P55289 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH12P55289 AC096586.2-201ENST00000610260 441 ntBASIC5.87□□□□□ -1.47
CDH12P55289 U1.25-201ENST00000614085 162 ntBASIC5.87□□□□□ -1.47
CDH12P55289 U1.34-201ENST00000618578 162 ntBASIC5.87□□□□□ -1.47
CDH12P55289 U1.31-201ENST00000620022 160 ntBASIC5.87□□□□□ -1.47
CDH12P55289 AL359742.1-201ENST00000622497 540 ntBASIC5.87□□□□□ -1.47
CDH12P55289 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH12P55289 AC004023.1-201ENST00000561473 1744 ntBASIC5.87□□□□□ -1.47
CDH12P55289 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH12P55289 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH12P55289 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH12P55289 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH12P55289 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CDH12P55289 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH12P55289 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH12P55289 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH12P55289 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH12P55289 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CDH12P55289 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
CDH12P55289 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH12P55289 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH12P55289 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH12P55289 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms