Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CDH6P55285 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH6P55285 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 AC005225.5-201ENST00000623547 2225 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH6P55285 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH6P55285 RNA5SP375-201ENST00000362975 119 ntBASIC6.38□□□□□ -1.39
CDH6P55285 RN7SKP250-201ENST00000363924 321 ntBASIC6.38□□□□□ -1.39
CDH6P55285 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH6P55285 TRGV5P-201ENST00000419915 354 ntBASIC6.38□□□□□ -1.39
CDH6P55285 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 AC099782.1-201ENST00000425889 474 ntBASIC6.38□□□□□ -1.39
CDH6P55285 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 AC097359.1-201ENST00000447946 463 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 AL445687.2-201ENST00000458156 728 ntBASIC6.38□□□□□ -1.39
CDH6P55285 RN7SL552P-201ENST00000462094 276 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AC098818.1-201ENST00000478593 252 ntBASIC6.38□□□□□ -1.39
CDH6P55285 RPS27P20-201ENST00000492051 246 ntBASIC6.38□□□□□ -1.39
CDH6P55285 RN7SL568P-201ENST00000493069 298 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.38□□□□□ -1.39
CDH6P55285 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.38□□□□□ -1.39
CDH6P55285 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH6P55285 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.38□□□□□ -1.39
CDH6P55285 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 AC011500.1-201ENST00000601963 469 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AC004890.3-201ENST00000605566 1095 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AC141002.1-201ENST00000607025 279 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 RN7SL261P-201ENST00000613441 282 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AP003789.1-201ENST00000617737 605 ntBASIC6.38□□□□□ -1.39
CDH6P55285 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 SSXP3-201ENST00000442971 1300 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AC018717.1-201ENST00000457712 1505 ntBASIC6.38□□□□□ -1.39
CDH6P55285 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 AL355377.1-201ENST00000621125 1653 ntBASIC6.38□□□□□ -1.39
CDH6P55285 AC011416.1-201ENST00000514947 1732 ntBASIC6.38□□□□□ -1.39
CDH6P55285 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH6P55285 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CDH6P55285 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH6P55285 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.38□□□□□ -1.39
CDH6P55285 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH6P55285 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
CDH6P55285 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CDH6P55285 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH6P55285 AC137056.2-201ENST00000624055 1958 ntBASIC6.37□□□□□ -1.39
CDH6P55285 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CDH6P55285 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH6P55285 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH6P55285 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH6P55285 AC121334.1-201ENST00000396414 802 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AL121835.1-201ENST00000404250 354 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH6P55285 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH6P55285 IGLV3-4-201ENST00000432300 244 ntBASIC6.37□□□□□ -1.39
CDH6P55285 OR3D1P-201ENST00000438288 955 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH6P55285 AC114728.1-201ENST00000488289 483 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AL035690.1-201ENST00000490892 383 ntBASIC6.37□□□□□ -1.39
CDH6P55285 SNX18P25-201ENST00000510539 758 ntBASIC6.37□□□□□ -1.39
CDH6P55285 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH6P55285 ZNF519P4-201ENST00000514008 125 ntBASIC6.37□□□□□ -1.39
CDH6P55285 CYP4F27P-201ENST00000514557 494 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH6P55285 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH6P55285 OR5D2P-201ENST00000524390 911 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AP003033.2-201ENST00000528901 805 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH6P55285 AC018558.5-201ENST00000565840 952 ntBASIC6.37□□□□□ -1.39
CDH6P55285 GLYATL1P2-202ENST00000588046 902 ntBASIC6.37□□□□□ -1.39
CDH6P55285 MIR132-201ENST00000591554 101 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AP001823.1-201ENST00000604056 1003 ntBASIC6.37□□□□□ -1.39
CDH6P55285 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.37□□□□□ -1.39
CDH6P55285 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AL157762.1-201ENST00000619612 415 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH6P55285 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH6P55285 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CDH6P55285 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CDH6P55285 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CDH6P55285 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 451 ms