Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDH4P55283 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH4P55283 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH4P55283 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDH4P55283 ZNF969P-201ENST00000510345 2341 ntBASIC6.34□□□□□ -1.39
CDH4P55283 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH4P55283 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDH4P55283 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.34□□□□□ -1.39
CDH4P55283 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH4P55283 HDAC1P2-201ENST00000453661 1398 ntBASIC6.34□□□□□ -1.39
CDH4P55283 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH4P55283 AL359091.1-201ENST00000449048 1734 ntBASIC6.34□□□□□ -1.39
CDH4P55283 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH4P55283 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.34□□□□□ -1.39
CDH4P55283 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDH4P55283 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH4P55283 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH4P55283 SUMO2P8-201ENST00000434672 286 ntBASIC6.34□□□□□ -1.39
CDH4P55283 PNKDP1-201ENST00000435914 430 ntBASIC6.34□□□□□ -1.39
CDH4P55283 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.34□□□□□ -1.39
CDH4P55283 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH4P55283 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH4P55283 AC021269.1-201ENST00000526860 705 ntBASIC6.34□□□□□ -1.39
CDH4P55283 OR6M2P-201ENST00000529831 871 ntBASIC6.34□□□□□ -1.39
CDH4P55283 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH4P55283 AC092332.1-201ENST00000563684 829 ntBASIC6.34□□□□□ -1.39
CDH4P55283 AC007346.1-201ENST00000569208 867 ntBASIC6.34□□□□□ -1.39
CDH4P55283 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDH4P55283 AP001437.1-201ENST00000608783 456 ntBASIC6.34□□□□□ -1.39
CDH4P55283 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.34□□□□□ -1.39
CDH4P55283 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH4P55283 RFPL4AP6-201ENST00000616792 846 ntBASIC6.34□□□□□ -1.39
CDH4P55283 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.34□□□□□ -1.39
CDH4P55283 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH4P55283 AC116667.2-201ENST00000641075 823 ntBASIC6.34□□□□□ -1.39
CDH4P55283 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH4P55283 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CDH4P55283 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH4P55283 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CDH4P55283 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
CDH4P55283 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 AP000547.3-204ENST00000588548 2523 ntBASIC6.33□□□□□ -1.4
CDH4P55283 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH4P55283 AC096921.2-201ENST00000561507 1916 ntBASIC6.33□□□□□ -1.4
CDH4P55283 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 RPS7P8-201ENST00000418311 581 ntBASIC6.33□□□□□ -1.4
CDH4P55283 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH4P55283 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
CDH4P55283 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH4P55283 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 RPL6P30-201ENST00000443382 862 ntBASIC6.33□□□□□ -1.4
CDH4P55283 PRMT5P1-201ENST00000514351 598 ntBASIC6.33□□□□□ -1.4
CDH4P55283 CR383658.1-201ENST00000514609 734 ntBASIC6.33□□□□□ -1.4
CDH4P55283 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH4P55283 AC093524.1-201ENST00000564266 1094 ntBASIC6.33□□□□□ -1.4
CDH4P55283 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH4P55283 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 AC091167.5-201ENST00000605689 894 ntBASIC6.33□□□□□ -1.4
CDH4P55283 AL512652.1-201ENST00000619006 500 ntBASIC6.33□□□□□ -1.4
CDH4P55283 AL137067.2-201ENST00000621202 131 ntBASIC6.33□□□□□ -1.4
CDH4P55283 AC004836.1-201ENST00000623032 634 ntBASIC6.33□□□□□ -1.4
CDH4P55283 AC003992.1-201ENST00000635364 557 ntBASIC6.33□□□□□ -1.4
CDH4P55283 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH4P55283 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 CAP1P2-201ENST00000417455 1409 ntBASIC6.33□□□□□ -1.4
CDH4P55283 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH4P55283 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH4P55283 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH4P55283 AC022325.1-201ENST00000502748 2199 ntBASIC6.33□□□□□ -1.4
CDH4P55283 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
CDH4P55283 AOX3P-204ENST00000491025 2107 ntBASIC6.32□□□□□ -1.4
CDH4P55283 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 CCNT2P1-201ENST00000423082 1315 ntBASIC6.32□□□□□ -1.4
CDH4P55283 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDH4P55283 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms