Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HMGCS2P54868 BMS1P13-201ENST00000417301 885 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGCS2P54868 TUBB4BP6-201ENST00000437576 479 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGCS2P54868 BMS1P10-201ENST00000443754 1120 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 AC016027.4-201ENST00000450866 277 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGCS2P54868 RNA5SP362-201ENST00000516048 118 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 RPA2P3-201ENST00000533268 770 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGCS2P54868 MIR4489-201ENST00000578869 62 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 RNU4ATAC-201ENST00000580972 127 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 MIR4443-201ENST00000585052 53 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGCS2P54868 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGCS2P54868 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGCS2P54868 AC116667.2-201ENST00000641075 823 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGCS2P54868 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGCS2P54868 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGCS2P54868 AC012254.3-201ENST00000591183 2117 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.07□□□□□ -1.28
HMGCS2P54868 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HMGCS2P54868 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HMGCS2P54868 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGCS2P54868 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.07□□□□□ -1.28
HMGCS2P54868 FO082842.1-201ENST00000423552 1370 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HMGCS2P54868 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HMGCS2P54868 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGCS2P54868 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGCS2P54868 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HMGCS2P54868 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
HMGCS2P54868 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGCS2P54868 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGCS2P54868 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HMGCS2P54868 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HMGCS2P54868 SNRPEP6-201ENST00000407465 277 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 RN7SKP293-201ENST00000411389 296 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGCS2P54868 SDHDP6-201ENST00000414693 480 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.06□□□□□ -1.28
HMGCS2P54868 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGCS2P54868 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.06□□□□□ -1.28
HMGCS2P54868 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.06□□□□□ -1.28
HMGCS2P54868 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGCS2P54868 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGCS2P54868 BZW1P1-201ENST00000454901 1240 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 RN7SL629P-201ENST00000489622 285 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 RNA5SP400-201ENST00000517155 111 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGCS2P54868 MIR3176-201ENST00000582210 90 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 AL021918.2-201ENST00000613415 194 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGCS2P54868 AC011815.2-201ENST00000618230 2021 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HMGCS2P54868 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HMGCS2P54868 AC092724.1-201ENST00000624623 3397 ntBASIC7.06□□□□□ -1.28
HMGCS2P54868 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGCS2P54868 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.06□□□□□ -1.28
HMGCS2P54868 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGCS2P54868 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HMGCS2P54868 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HMGCS2P54868 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HMGCS2P54868 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGCS2P54868 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGCS2P54868 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.05□□□□□ -1.28
HMGCS2P54868 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HMGCS2P54868 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HMGCS2P54868 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HMGCS2P54868 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGCS2P54868 MIR375-201ENST00000362103 64 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 RNU1-24P-201ENST00000364285 165 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.05□□□□□ -1.28
HMGCS2P54868 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGCS2P54868 CYP4F30P-202ENST00000420048 405 ntBASIC7.05□□□□□ -1.28
HMGCS2P54868 RPS15AP30-201ENST00000420976 390 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms