Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 AC034229.2-201ENST00000566945 2508 ntBASIC6.74□□□□□ -1.33
COPAP53621 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 LINC01613-201ENST00000561476 2780 ntBASIC6.74□□□□□ -1.33
COPAP53621 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.74□□□□□ -1.33
COPAP53621 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 AL442128.2-201ENST00000620246 1824 ntBASIC6.73□□□□□ -1.33
COPAP53621 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 OR2M1P-201ENST00000318104 951 ntBASIC6.73□□□□□ -1.33
COPAP53621 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 RNU6-618P-201ENST00000363518 112 ntBASIC6.73□□□□□ -1.33
COPAP53621 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COPAP53621 AL358178.1-201ENST00000407698 397 ntBASIC6.73□□□□□ -1.33
COPAP53621 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.73□□□□□ -1.33
COPAP53621 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.73□□□□□ -1.33
COPAP53621 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.73□□□□□ -1.33
COPAP53621 AL512504.1-201ENST00000415494 778 ntBASIC6.73□□□□□ -1.33
COPAP53621 AL663061.1-201ENST00000416625 580 ntBASIC6.73□□□□□ -1.33
COPAP53621 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COPAP53621 AC002069.1-201ENST00000429649 1159 ntBASIC6.73□□□□□ -1.33
COPAP53621 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.73□□□□□ -1.33
COPAP53621 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.73□□□□□ -1.33
COPAP53621 RPS15AP29-201ENST00000445539 400 ntBASIC6.73□□□□□ -1.33
COPAP53621 AL020997.1-201ENST00000446554 349 ntBASIC6.73□□□□□ -1.33
COPAP53621 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 MTND3P3-201ENST00000505004 126 ntBASIC6.73□□□□□ -1.33
COPAP53621 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.73□□□□□ -1.33
COPAP53621 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.73□□□□□ -1.33
COPAP53621 KCTD9P6-201ENST00000522306 950 ntBASIC6.73□□□□□ -1.33
COPAP53621 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.73□□□□□ -1.33
COPAP53621 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.73□□□□□ -1.33
COPAP53621 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.73□□□□□ -1.33
COPAP53621 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 MIR3154-201ENST00000577829 84 ntBASIC6.73□□□□□ -1.33
COPAP53621 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 AC011497.2-201ENST00000600255 639 ntBASIC6.73□□□□□ -1.33
COPAP53621 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 AP001885.1-201ENST00000621658 558 ntBASIC6.73□□□□□ -1.33
COPAP53621 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.73□□□□□ -1.33
COPAP53621 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPAP53621 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.73□□□□□ -1.33
COPAP53621 DDX18P6-201ENST00000450119 1997 ntBASIC6.73□□□□□ -1.33
COPAP53621 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.73□□□□□ -1.33
COPAP53621 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.72□□□□□ -1.33
COPAP53621 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.72□□□□□ -1.33
COPAP53621 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 DOCK11P1-201ENST00000553480 5932 ntBASIC6.72□□□□□ -1.33
COPAP53621 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 SNORA38B-201ENST00000363524 131 ntBASIC6.72□□□□□ -1.33
COPAP53621 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.72□□□□□ -1.33
COPAP53621 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.72□□□□□ -1.33
COPAP53621 PRELID1P1-201ENST00000403549 660 ntBASIC6.72□□□□□ -1.33
COPAP53621 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COPAP53621 RANP6-201ENST00000413691 644 ntBASIC6.72□□□□□ -1.33
COPAP53621 EEF1B2P8-201ENST00000414101 671 ntBASIC6.72□□□□□ -1.33
COPAP53621 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 RPL17P35-201ENST00000432217 549 ntBASIC6.72□□□□□ -1.33
COPAP53621 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.72□□□□□ -1.33
COPAP53621 AL606490.8-201ENST00000441624 319 ntBASIC6.72□□□□□ -1.33
COPAP53621 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.72□□□□□ -1.33
COPAP53621 MORF4L1P4-201ENST00000450245 976 ntBASIC6.72□□□□□ -1.33
COPAP53621 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.72□□□□□ -1.33
COPAP53621 RN7SL382P-201ENST00000482631 282 ntBASIC6.72□□□□□ -1.33
COPAP53621 AC117395.1-201ENST00000487390 403 ntBASIC6.72□□□□□ -1.33
COPAP53621 RPL17P2-201ENST00000491913 451 ntBASIC6.72□□□□□ -1.33
COPAP53621 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.72□□□□□ -1.33
COPAP53621 AC105420.1-201ENST00000504389 582 ntBASIC6.72□□□□□ -1.33
COPAP53621 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.72□□□□□ -1.33
COPAP53621 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.72□□□□□ -1.33
COPAP53621 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.72□□□□□ -1.33
COPAP53621 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.72□□□□□ -1.33
COPAP53621 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.72□□□□□ -1.33
COPAP53621 AC092718.4-201ENST00000566639 716 ntBASIC6.72□□□□□ -1.33
COPAP53621 RN7SL230P-201ENST00000580835 303 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms