Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.12□□□□□ -1.43
PDX1P52945 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 RNA5SP346-201ENST00000363541 121 ntBASIC6.12□□□□□ -1.43
PDX1P52945 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
PDX1P52945 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.12□□□□□ -1.43
PDX1P52945 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDX1P52945 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.12□□□□□ -1.43
PDX1P52945 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.12□□□□□ -1.43
PDX1P52945 YY1P1-201ENST00000427625 668 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 AL451136.1-201ENST00000435399 325 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.12□□□□□ -1.43
PDX1P52945 AC062022.1-201ENST00000451026 1684 ntBASIC6.12□□□□□ -1.43
PDX1P52945 PPIAP7-201ENST00000454070 489 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 AC104109.1-201ENST00000498563 436 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.12□□□□□ -1.43
PDX1P52945 KHDC1P1-201ENST00000511053 508 ntBASIC6.12□□□□□ -1.43
PDX1P52945 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.12□□□□□ -1.43
PDX1P52945 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 SNORA81.2-201ENST00000516868 170 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AC022784.5-201ENST00000522241 437 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 AP000620.1-201ENST00000527147 504 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.12□□□□□ -1.43
PDX1P52945 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDX1P52945 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.12□□□□□ -1.43
PDX1P52945 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.12□□□□□ -1.43
PDX1P52945 AL391261.1-201ENST00000555712 1479 ntBASIC6.12□□□□□ -1.43
PDX1P52945 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.12□□□□□ -1.43
PDX1P52945 AC007346.1-201ENST00000569208 867 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AC008521.2-201ENST00000591021 259 ntBASIC6.12□□□□□ -1.43
PDX1P52945 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 AC090953.1-201ENST00000604305 1092 ntBASIC6.12□□□□□ -1.43
PDX1P52945 AC097467.4-201ENST00000605504 141 ntBASIC6.12□□□□□ -1.43
PDX1P52945 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PDX1P52945 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 AC129915.3-201ENST00000634128 948 ntBASIC6.12□□□□□ -1.43
PDX1P52945 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.12□□□□□ -1.43
PDX1P52945 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDX1P52945 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PDX1P52945 AC006213.6-201ENST00000623722 4179 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.11□□□□□ -1.43
PDX1P52945 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDX1P52945 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDX1P52945 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PDX1P52945 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.11□□□□□ -1.43
PDX1P52945 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.11□□□□□ -1.43
PDX1P52945 AL157884.1-201ENST00000424561 454 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.11□□□□□ -1.43
PDX1P52945 AC023141.3-201ENST00000436698 278 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.11□□□□□ -1.43
PDX1P52945 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.11□□□□□ -1.43
PDX1P52945 AC092824.1-201ENST00000483524 576 ntBASIC6.11□□□□□ -1.43
PDX1P52945 NPM1P27-201ENST00000502784 830 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AC011411.1-201ENST00000509592 876 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.11□□□□□ -1.43
PDX1P52945 RNA5SP340-201ENST00000517132 107 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AC092332.1-201ENST00000563684 829 ntBASIC6.11□□□□□ -1.43
PDX1P52945 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.11□□□□□ -1.43
PDX1P52945 MTATP6P25-201ENST00000574491 261 ntBASIC6.11□□□□□ -1.43
PDX1P52945 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AC100767.2-201ENST00000604840 693 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AC025171.4-201ENST00000607250 1047 ntBASIC6.11□□□□□ -1.43
PDX1P52945 AP000894.4-201ENST00000610185 483 ntBASIC6.11□□□□□ -1.43
PDX1P52945 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.11□□□□□ -1.43
PDX1P52945 MRPL57P1-201ENST00000621486 265 ntBASIC6.11□□□□□ -1.43
PDX1P52945 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PDX1P52945 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDX1P52945 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDX1P52945 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDX1P52945 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms