Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 AP005119.1-201ENST00000580956 292 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.18□□□□□ -1.26
NEDD4P46934 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.18□□□□□ -1.26
NEDD4P46934 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.18□□□□□ -1.26
NEDD4P46934 MTCO1P28-201ENST00000574177 1528 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NEDD4P46934 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD4P46934 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD4P46934 AP004289.1-201ENST00000436307 2205 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD4P46934 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD4P46934 RNU105B-201ENST00000364478 208 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD4P46934 AC245096.1-201ENST00000413104 546 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 PTCD2P2-201ENST00000415579 1095 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 AC016027.4-201ENST00000450866 277 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 PPIAP27-201ENST00000453800 265 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 AC009963.3-201ENST00000458090 486 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.17□□□□□ -1.26
NEDD4P46934 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD4P46934 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.17□□□□□ -1.26
NEDD4P46934 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD4P46934 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NEDD4P46934 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD4P46934 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.17□□□□□ -1.26
NEDD4P46934 AC096861.1-201ENST00000616652 240 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 AP001052.1-201ENST00000626421 99 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD4P46934 LYARP1-201ENST00000436977 1501 ntBASIC7.17□□□□□ -1.26
NEDD4P46934 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NEDD4P46934 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD4P46934 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD4P46934 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NEDD4P46934 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD4P46934 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
NEDD4P46934 AC005831.1-201ENST00000624384 1697 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
NEDD4P46934 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
NEDD4P46934 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD4P46934 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD4P46934 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD4P46934 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD4P46934 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD4P46934 HMGA1P8-201ENST00000414130 321 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 RPS17P17-201ENST00000419392 409 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
NEDD4P46934 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD4P46934 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD4P46934 AC069154.1-201ENST00000432914 542 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 AC110602.1-201ENST00000437414 318 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 RPL6P30-201ENST00000443382 862 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.16□□□□□ -1.26
NEDD4P46934 CST12P-201ENST00000457644 362 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.16□□□□□ -1.26
NEDD4P46934 PRMT5P1-201ENST00000514351 598 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.16□□□□□ -1.26
NEDD4P46934 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD4P46934 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.16□□□□□ -1.26
NEDD4P46934 AC079905.1-201ENST00000549280 475 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 AC090651.1-201ENST00000567865 634 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 AC090826.1-203ENST00000569235 490 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 LINC00556-201ENST00000569603 412 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 AC008507.3-201ENST00000585753 472 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
NEDD4P46934 uc_338.26-201ENST00000612659 160 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 AL136228.1-201ENST00000622221 319 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 AC025262.3-201ENST00000623666 360 ntBASIC7.16□□□□□ -1.26
NEDD4P46934 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.16□□□□□ -1.26
NEDD4P46934 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD4P46934 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.16□□□□□ -1.26
NEDD4P46934 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD4P46934 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
NEDD4P46934 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD4P46934 CAP1P2-201ENST00000417455 1409 ntBASIC7.15□□□□□ -1.26
NEDD4P46934 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
NEDD4P46934 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.15□□□□□ -1.26
NEDD4P46934 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD4P46934 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.15□□□□□ -1.26
NEDD4P46934 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD4P46934 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD4P46934 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD4P46934 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD4P46934 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD4P46934 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD4P46934 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD4P46934 OR10R3P-201ENST00000361688 942 ntBASIC7.15□□□□□ -1.26
NEDD4P46934 RNA5SP433-201ENST00000364491 114 ntBASIC7.15□□□□□ -1.26
NEDD4P46934 RN7SKP275-201ENST00000364626 301 ntBASIC7.15□□□□□ -1.26
NEDD4P46934 SNORA70.9-201ENST00000384370 135 ntBASIC7.15□□□□□ -1.26
NEDD4P46934 AL360271.1-201ENST00000395679 510 ntBASIC7.15□□□□□ -1.26
NEDD4P46934 RN7SKP151-201ENST00000410230 316 ntBASIC7.15□□□□□ -1.26
NEDD4P46934 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms