Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.18□□□□□ -1.42
HNF4AP41235 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.18□□□□□ -1.42
HNF4AP41235 AC024255.1-201ENST00000614376 102 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 AL445649.1-201ENST00000615941 691 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.18□□□□□ -1.42
HNF4AP41235 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.17□□□□□ -1.42
HNF4AP41235 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HNF4AP41235 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HNF4AP41235 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HNF4AP41235 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 AL353743.3-201ENST00000442109 1468 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.17□□□□□ -1.42
HNF4AP41235 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.17□□□□□ -1.42
HNF4AP41235 AC005225.5-201ENST00000623547 2225 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 AC011815.2-201ENST00000618230 2021 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HNF4AP41235 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
HNF4AP41235 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.17□□□□□ -1.42
HNF4AP41235 RN7SKP281-201ENST00000410472 352 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 UBE2V1P14-201ENST00000415815 558 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AC096644.3-201ENST00000416788 338 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 CYP4F30P-202ENST00000420048 405 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AL355994.1-201ENST00000424379 260 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AL157884.1-201ENST00000424561 454 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AC245884.2-201ENST00000426257 404 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 RAB9AP5-201ENST00000437794 597 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.17□□□□□ -1.42
HNF4AP41235 RAB9AP2-201ENST00000443911 597 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.17□□□□□ -1.42
HNF4AP41235 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.17□□□□□ -1.42
HNF4AP41235 AC239798.3-201ENST00000454459 408 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.17□□□□□ -1.42
HNF4AP41235 RBMY2HP-201ENST00000457961 720 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 RN7SL165P-201ENST00000477476 291 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AL133372.1-201ENST00000493565 745 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.17□□□□□ -1.42
HNF4AP41235 RN7SKP67-201ENST00000515905 235 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.17□□□□□ -1.42
HNF4AP41235 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.17□□□□□ -1.42
HNF4AP41235 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.17□□□□□ -1.42
HNF4AP41235 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.17□□□□□ -1.42
HNF4AP41235 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.17□□□□□ -1.42
HNF4AP41235 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 AC009120.3-201ENST00000563335 499 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.17□□□□□ -1.42
HNF4AP41235 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.17□□□□□ -1.42
HNF4AP41235 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.17□□□□□ -1.42
HNF4AP41235 AC060766.1-201ENST00000590824 627 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AL589743.6-201ENST00000611025 117 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AL138960.1-201ENST00000613838 513 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.17□□□□□ -1.42
HNF4AP41235 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 GTF2IP4-201ENST00000453092 2054 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.17□□□□□ -1.42
HNF4AP41235 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.17□□□□□ -1.42
HNF4AP41235 AC011504.1-201ENST00000623331 4103 ntBASIC6.17□□□□□ -1.42
HNF4AP41235 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HNF4AP41235 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HNF4AP41235 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HNF4AP41235 AC217777.1-201ENST00000570034 1471 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
HNF4AP41235 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HNF4AP41235 MTCO1P7-201ENST00000419523 1542 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 AC092724.1-201ENST00000624623 3397 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 285.4 ms