Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.18□□□□□ -1.42
CD40P25942 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.18□□□□□ -1.42
CD40P25942 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.18□□□□□ -1.42
CD40P25942 OR7E7P-201ENST00000455678 1012 ntBASIC6.18□□□□□ -1.42
CD40P25942 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.18□□□□□ -1.42
CD40P25942 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 RN7SL849P-201ENST00000485236 295 ntBASIC6.18□□□□□ -1.42
CD40P25942 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.18□□□□□ -1.42
CD40P25942 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.18□□□□□ -1.42
CD40P25942 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.18□□□□□ -1.42
CD40P25942 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.18□□□□□ -1.42
CD40P25942 AC138938.1-201ENST00000515431 782 ntBASIC6.18□□□□□ -1.42
CD40P25942 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.18□□□□□ -1.42
CD40P25942 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.18□□□□□ -1.42
CD40P25942 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.18□□□□□ -1.42
CD40P25942 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 OR5M6P-201ENST00000530227 937 ntBASIC6.18□□□□□ -1.42
CD40P25942 SSU72P6-201ENST00000532644 488 ntBASIC6.18□□□□□ -1.42
CD40P25942 PHBP2-201ENST00000532859 806 ntBASIC6.18□□□□□ -1.42
CD40P25942 AC090695.1-201ENST00000561269 1222 ntBASIC6.18□□□□□ -1.42
CD40P25942 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 AC109446.2-201ENST00000567872 497 ntBASIC6.18□□□□□ -1.42
CD40P25942 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.18□□□□□ -1.42
CD40P25942 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 AC110760.3-201ENST00000598794 467 ntBASIC6.18□□□□□ -1.42
CD40P25942 AC022001.1-201ENST00000605193 268 ntBASIC6.18□□□□□ -1.42
CD40P25942 MIR6070-201ENST00000613967 103 ntBASIC6.18□□□□□ -1.42
CD40P25942 AC007671.1-201ENST00000616957 830 ntBASIC6.18□□□□□ -1.42
CD40P25942 AP000676.3-201ENST00000623299 569 ntBASIC6.18□□□□□ -1.42
CD40P25942 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CD40P25942 AC068620.4-201ENST00000636730 1182 ntBASIC6.18□□□□□ -1.42
CD40P25942 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CD40P25942 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 OR2A20P-201ENST00000479887 2913 ntBASIC6.18□□□□□ -1.42
CD40P25942 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD40P25942 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.18□□□□□ -1.42
CD40P25942 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CD40P25942 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC6.18□□□□□ -1.42
CD40P25942 KARSP2-201ENST00000415696 1639 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC073055.1-201ENST00000456901 1621 ntBASIC6.17□□□□□ -1.42
CD40P25942 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CD40P25942 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 SAMMSON-222ENST00000641901 2727 ntBASIC6.17□□□□□ -1.42
CD40P25942 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 AC011503.2-201ENST00000594230 1500 ntBASIC6.17□□□□□ -1.42
CD40P25942 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 FAM204BP-201ENST00000369171 701 ntBASIC6.17□□□□□ -1.42
CD40P25942 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 RNU6-1263P-201ENST00000384601 106 ntBASIC6.17□□□□□ -1.42
CD40P25942 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 PDCL3P5-201ENST00000398028 722 ntBASIC6.17□□□□□ -1.42
CD40P25942 EEF1GP6-201ENST00000402309 905 ntBASIC6.17□□□□□ -1.42
CD40P25942 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 PRELID1P2-201ENST00000407805 396 ntBASIC6.17□□□□□ -1.42
CD40P25942 MIR1302-8-201ENST00000408342 128 ntBASIC6.17□□□□□ -1.42
CD40P25942 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 RN7SKP268-201ENST00000411107 316 ntBASIC6.17□□□□□ -1.42
CD40P25942 RNA5SP280-201ENST00000411230 115 ntBASIC6.17□□□□□ -1.42
CD40P25942 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.17□□□□□ -1.42
CD40P25942 ZNF885P-201ENST00000420174 1098 ntBASIC6.17□□□□□ -1.42
CD40P25942 OR5W1P-201ENST00000423705 938 ntBASIC6.17□□□□□ -1.42
CD40P25942 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms