Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MTCYBP20-201ENST00000524239 1129 ntBASIC7.98□□□□□ -1.13
LIG1P18858 LRRC6P1-201ENST00000532188 885 ntBASIC7.98□□□□□ -1.13
LIG1P18858 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.98□□□□□ -1.13
LIG1P18858 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.98□□□□□ -1.13
LIG1P18858 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.98□□□□□ -1.13
LIG1P18858 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.98□□□□□ -1.13
LIG1P18858 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC7.98□□□□□ -1.13
LIG1P18858 AC027807.1-201ENST00000559921 996 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.98□□□□□ -1.13
LIG1P18858 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.98□□□□□ -1.13
LIG1P18858 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.98□□□□□ -1.13
LIG1P18858 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.98□□□□□ -1.13
LIG1P18858 MIR4470-201ENST00000583453 72 ntBASIC7.98□□□□□ -1.13
LIG1P18858 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 CYCSP1-201ENST00000604815 315 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AC107952.2-201ENST00000606048 486 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC7.98□□□□□ -1.13
LIG1P18858 AC063962.1-201ENST00000608199 521 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AL445649.1-201ENST00000615941 691 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AL035461.2-201ENST00000619201 524 ntBASIC7.98□□□□□ -1.13
LIG1P18858 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 AC079298.2-201ENST00000623885 459 ntBASIC7.98□□□□□ -1.13
LIG1P18858 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 BX284613.1-201ENST00000452221 1641 ntBASIC7.98□□□□□ -1.13
LIG1P18858 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.98□□□□□ -1.13
LIG1P18858 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.98□□□□□ -1.13
LIG1P18858 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIG1P18858 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
LIG1P18858 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
LIG1P18858 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 RNU6-623P-201ENST00000363143 105 ntBASIC7.97□□□□□ -1.13
LIG1P18858 RNU6-1017P-201ENST00000363613 106 ntBASIC7.97□□□□□ -1.13
LIG1P18858 AC234772.1-201ENST00000377927 937 ntBASIC7.97□□□□□ -1.13
LIG1P18858 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
LIG1P18858 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 RNU4-27P-201ENST00000410889 139 ntBASIC7.97□□□□□ -1.13
LIG1P18858 RN7SKP85-201ENST00000411349 318 ntBASIC7.97□□□□□ -1.13
LIG1P18858 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC7.97□□□□□ -1.13
LIG1P18858 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC7.97□□□□□ -1.13
LIG1P18858 OR52S1P-201ENST00000427016 937 ntBASIC7.97□□□□□ -1.13
LIG1P18858 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.97□□□□□ -1.13
LIG1P18858 RPL21P33-201ENST00000444831 484 ntBASIC7.97□□□□□ -1.13
LIG1P18858 SDHCP3-201ENST00000445371 506 ntBASIC7.97□□□□□ -1.13
LIG1P18858 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC7.97□□□□□ -1.13
LIG1P18858 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC7.97□□□□□ -1.13
LIG1P18858 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.97□□□□□ -1.13
LIG1P18858 AC126121.1-201ENST00000482313 553 ntBASIC7.97□□□□□ -1.13
LIG1P18858 NPM1P29-201ENST00000483112 803 ntBASIC7.97□□□□□ -1.13
LIG1P18858 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.97□□□□□ -1.13
LIG1P18858 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.97□□□□□ -1.13
LIG1P18858 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.97□□□□□ -1.13
LIG1P18858 AC087373.1-201ENST00000524920 491 ntBASIC7.97□□□□□ -1.13
LIG1P18858 OR9L1P-201ENST00000529493 933 ntBASIC7.97□□□□□ -1.13
LIG1P18858 OR7E128P-201ENST00000532736 1024 ntBASIC7.97□□□□□ -1.13
LIG1P18858 AC079866.1-201ENST00000534985 1220 ntBASIC7.97□□□□□ -1.13
LIG1P18858 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.97□□□□□ -1.13
LIG1P18858 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.97□□□□□ -1.13
LIG1P18858 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.97□□□□□ -1.13
LIG1P18858 RPS7P1-201ENST00000571702 585 ntBASIC7.97□□□□□ -1.13
LIG1P18858 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.97□□□□□ -1.13
LIG1P18858 AC107993.1-201ENST00000591343 684 ntBASIC7.97□□□□□ -1.13
LIG1P18858 AC012640.3-201ENST00000607847 430 ntBASIC7.97□□□□□ -1.13
LIG1P18858 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.97□□□□□ -1.13
LIG1P18858 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 AL356361.1-201ENST00000400943 1459 ntBASIC7.97□□□□□ -1.13
LIG1P18858 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.97□□□□□ -1.13
LIG1P18858 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LIG1P18858 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.97□□□□□ -1.13
LIG1P18858 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LIG1P18858 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms