Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NFU1P1-201ENST00000413128 774 ntBASIC5.73□□□□□ -1.49
NCK1P16333 AL354868.1-201ENST00000417077 482 ntBASIC5.73□□□□□ -1.49
NCK1P16333 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.73□□□□□ -1.49
NCK1P16333 CLCN3P1-201ENST00000423965 1017 ntBASIC5.73□□□□□ -1.49
NCK1P16333 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.73□□□□□ -1.49
NCK1P16333 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.73□□□□□ -1.49
NCK1P16333 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.73□□□□□ -1.49
NCK1P16333 AC002075.1-201ENST00000457396 676 ntBASIC5.73□□□□□ -1.49
NCK1P16333 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.73□□□□□ -1.49
NCK1P16333 RN7SL643P-201ENST00000471845 291 ntBASIC5.73□□□□□ -1.49
NCK1P16333 SNX18P24-201ENST00000505249 671 ntBASIC5.73□□□□□ -1.49
NCK1P16333 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.73□□□□□ -1.49
NCK1P16333 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NCK1P16333 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.73□□□□□ -1.49
NCK1P16333 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
NCK1P16333 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 AP002004.1-206ENST00000532441 876 ntBASIC5.73□□□□□ -1.49
NCK1P16333 AC103855.4-201ENST00000533158 265 ntBASIC5.73□□□□□ -1.49
NCK1P16333 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.73□□□□□ -1.49
NCK1P16333 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.73□□□□□ -1.49
NCK1P16333 AC025857.2-201ENST00000602711 238 ntBASIC5.73□□□□□ -1.49
NCK1P16333 AC010998.3-201ENST00000613871 631 ntBASIC5.73□□□□□ -1.49
NCK1P16333 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.73□□□□□ -1.49
NCK1P16333 AL157762.1-201ENST00000619612 415 ntBASIC5.73□□□□□ -1.49
NCK1P16333 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.73□□□□□ -1.49
NCK1P16333 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.73□□□□□ -1.49
NCK1P16333 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 FANCD2P2-201ENST00000437591 1400 ntBASIC5.73□□□□□ -1.49
NCK1P16333 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
NCK1P16333 AC239868.2-201ENST00000564237 4527 ntBASIC5.73□□□□□ -1.49
NCK1P16333 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NCK1P16333 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NCK1P16333 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.72□□□□□ -1.49
NCK1P16333 CASC19-260ENST00000641828 2001 ntBASIC5.72□□□□□ -1.49
NCK1P16333 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NCK1P16333 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.72□□□□□ -1.49
NCK1P16333 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 AC027279.4-201ENST00000624371 2072 ntBASIC5.72□□□□□ -1.49
NCK1P16333 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NCK1P16333 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
NCK1P16333 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NCK1P16333 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 RNU1-5P-201ENST00000362684 144 ntBASIC5.72□□□□□ -1.49
NCK1P16333 RNA5SP302-201ENST00000364896 100 ntBASIC5.72□□□□□ -1.49
NCK1P16333 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.72□□□□□ -1.49
NCK1P16333 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NCK1P16333 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.72□□□□□ -1.49
NCK1P16333 LDHAP2-201ENST00000437325 985 ntBASIC5.72□□□□□ -1.49
NCK1P16333 RPSAP41-201ENST00000439695 860 ntBASIC5.72□□□□□ -1.49
NCK1P16333 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.72□□□□□ -1.49
NCK1P16333 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.72□□□□□ -1.49
NCK1P16333 RN7SKP288-201ENST00000516227 268 ntBASIC5.72□□□□□ -1.49
NCK1P16333 snoU109.5-201ENST00000516231 132 ntBASIC5.72□□□□□ -1.49
NCK1P16333 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.72□□□□□ -1.49
NCK1P16333 AC141002.1-201ENST00000607025 279 ntBASIC5.72□□□□□ -1.49
NCK1P16333 AL008582.1-201ENST00000609612 442 ntBASIC5.72□□□□□ -1.49
NCK1P16333 uc_338.26-201ENST00000612659 160 ntBASIC5.72□□□□□ -1.49
NCK1P16333 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.72□□□□□ -1.49
NCK1P16333 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NCK1P16333 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.72□□□□□ -1.49
NCK1P16333 AC011933.2-201ENST00000578539 2790 ntBASIC5.72□□□□□ -1.49
NCK1P16333 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NCK1P16333 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.71□□□□□ -1.49
NCK1P16333 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.71□□□□□ -1.49
NCK1P16333 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NCK1P16333 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NCK1P16333 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms