Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC9.51□□□□□ -0.89
MS4A1P11836 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC9.51□□□□□ -0.89
MS4A1P11836 BMS1P15-201ENST00000554269 1141 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC9.51□□□□□ -0.89
MS4A1P11836 AC092133.1-201ENST00000565828 719 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 AL512347.1-201ENST00000566420 503 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC9.51□□□□□ -0.89
MS4A1P11836 AC012254.4-201ENST00000588843 273 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 TEX41-218ENST00000596540 882 ntTSL 5 BASIC9.51□□□□□ -0.89
MS4A1P11836 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC9.51□□□□□ -0.89
MS4A1P11836 AC004852.1-201ENST00000605206 154 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 AC012640.3-201ENST00000607847 430 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC9.51□□□□□ -0.89
MS4A1P11836 AL450226.2-201ENST00000622913 439 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 AL359757.1-201ENST00000623176 255 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 AL353608.4-201ENST00000624487 1188 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 AL132796.3-201ENST00000624703 900 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 METAP1-212ENST00000625963 147 ntTSL 5 BASIC9.51□□□□□ -0.89
MS4A1P11836 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MS4A1P11836 AP003471.1-202ENST00000319051 1988 ntBASIC9.51□□□□□ -0.89
MS4A1P11836 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MS4A1P11836 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MS4A1P11836 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
MS4A1P11836 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
MS4A1P11836 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MS4A1P11836 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
MS4A1P11836 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MS4A1P11836 AC130456.1-201ENST00000565085 1363 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC9.5□□□□□ -0.89
MS4A1P11836 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
MS4A1P11836 AL157831.2-201ENST00000564681 3095 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.5□□□□□ -0.89
MS4A1P11836 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
MS4A1P11836 AC005839.1-201ENST00000624148 3213 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
MS4A1P11836 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 Y_RNA.516-201ENST00000384541 124 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 HMGB3P1-201ENST00000393368 573 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 CNN3P1-201ENST00000401596 935 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC9.5□□□□□ -0.89
MS4A1P11836 AC130472.1-201ENST00000427885 309 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC9.5□□□□□ -0.89
MS4A1P11836 AC114755.4-201ENST00000439114 443 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC9.5□□□□□ -0.89
MS4A1P11836 FUNDC2P2-202ENST00000443452 493 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 RPSAP49-201ENST00000445182 886 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC9.5□□□□□ -0.89
MS4A1P11836 SEPT7P3-201ENST00000455017 621 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AC090058.1-201ENST00000498788 435 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC9.5□□□□□ -0.89
MS4A1P11836 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC9.5□□□□□ -0.89
MS4A1P11836 ST13P12-201ENST00000508958 1094 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 RPL37-205ENST00000509877 637 ntTSL 5 BASIC9.5□□□□□ -0.89
MS4A1P11836 AC026700.1-201ENST00000512074 544 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AC114801.1-201ENST00000512633 297 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC9.5□□□□□ -0.89
MS4A1P11836 SEPT10P1-201ENST00000517342 1162 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC9.5□□□□□ -0.89
MS4A1P11836 OR4A6P-201ENST00000534364 970 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AC136619.2-201ENST00000563361 631 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AC027104.1-201ENST00000563702 681 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 SNORA59B-202ENST00000578183 701 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 SNRPCP20-201ENST00000588011 210 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC9.5□□□□□ -0.89
MS4A1P11836 CUX2P1-201ENST00000606426 298 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 AC025253.1-201ENST00000613623 543 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 CR848007.1-201ENST00000442354 1699 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 AC089998.1-201ENST00000548575 3141 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC9.5□□□□□ -0.89
MS4A1P11836 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
MS4A1P11836 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
MS4A1P11836 AL512310.3-201ENST00000547023 1335 ntBASIC9.5□□□□□ -0.89
MS4A1P11836 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC9.5□□□□□ -0.89
MS4A1P11836 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
MS4A1P11836 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MS4A1P11836 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
MS4A1P11836 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
MS4A1P11836 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC9.49□□□□□ -0.89
MS4A1P11836 AC069222.1-201ENST00000608028 3360 ntBASIC9.49□□□□□ -0.89
MS4A1P11836 AL031651.1-201ENST00000615357 1438 ntBASIC9.49□□□□□ -0.89
MS4A1P11836 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MS4A1P11836 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MS4A1P11836 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MS4A1P11836 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC9.49□□□□□ -0.89
MS4A1P11836 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
MS4A1P11836 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MS4A1P11836 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MS4A1P11836 SF3A3P1-201ENST00000446317 1477 ntBASIC9.49□□□□□ -0.89
MS4A1P11836 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MS4A1P11836 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MS4A1P11836 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms