Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC10.37□□□□□ -0.75
TOP2AP11388 RNA5SP30-201ENST00000365552 115 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 HIST1H3PS1-201ENST00000404612 417 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC10.37□□□□□ -0.75
TOP2AP11388 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC10.37□□□□□ -0.75
TOP2AP11388 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TOP2AP11388 OR13K1P-201ENST00000444577 975 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 AC005532.2-201ENST00000467154 373 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 RN7SL583P-201ENST00000475692 287 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 AC073610.1-201ENST00000489971 396 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 AC008953.1-201ENST00000497334 318 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 AC109481.1-201ENST00000509173 282 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 BX510359.5-201ENST00000515651 304 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC10.37□□□□□ -0.75
TOP2AP11388 HSPE1P2-201ENST00000554777 306 ntBASIC10.37□□□□□ -0.75
TOP2AP11388 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC10.37□□□□□ -0.75
TOP2AP11388 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC10.37□□□□□ -0.75
TOP2AP11388 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC10.37□□□□□ -0.75
TOP2AP11388 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC10.37□□□□□ -0.75
TOP2AP11388 TNPO1P2-201ENST00000426249 2665 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 SRRM1P3-201ENST00000426911 2678 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TOP2AP11388 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TOP2AP11388 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC10.36□□□□□ -0.75
TOP2AP11388 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
TOP2AP11388 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
TOP2AP11388 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
TOP2AP11388 MAPK10-338ENST00000641647 3362 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
TOP2AP11388 RNA5SP131-201ENST00000365452 119 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC10.36□□□□□ -0.75
TOP2AP11388 NANOGP4-201ENST00000427230 913 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC10.36□□□□□ -0.75
TOP2AP11388 RANP1-206ENST00000455094 651 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 RPL32P33-201ENST00000487023 394 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC10.36□□□□□ -0.75
TOP2AP11388 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
TOP2AP11388 AC044860.2-201ENST00000561005 179 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 MIR7155-201ENST00000615925 56 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TOP2AP11388 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC10.36□□□□□ -0.75
TOP2AP11388 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
TOP2AP11388 AC092725.2-201ENST00000567658 1389 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 LINC01616-201ENST00000561816 2280 ntBASIC10.36□□□□□ -0.75
TOP2AP11388 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TOP2AP11388 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC10.35□□□□□ -0.75
TOP2AP11388 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC10.35□□□□□ -0.75
TOP2AP11388 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC10.35□□□□□ -0.75
TOP2AP11388 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC10.35□□□□□ -0.75
TOP2AP11388 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TOP2AP11388 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC10.35□□□□□ -0.75
TOP2AP11388 AC004129.2-201ENST00000457229 287 ntBASIC10.35□□□□□ -0.75
TOP2AP11388 AC100832.1-201ENST00000471945 383 ntBASIC10.35□□□□□ -0.75
TOP2AP11388 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC10.35□□□□□ -0.75
TOP2AP11388 AC024940.4-201ENST00000605507 246 ntBASIC10.35□□□□□ -0.75
TOP2AP11388 AL355974.3-201ENST00000617383 467 ntBASIC10.35□□□□□ -0.75
TOP2AP11388 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TOP2AP11388 AL391261.1-201ENST00000555712 1479 ntBASIC10.35□□□□□ -0.75
TOP2AP11388 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TOP2AP11388 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TOP2AP11388 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TOP2AP11388 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
TOP2AP11388 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
TOP2AP11388 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC10.34□□□□□ -0.75
TOP2AP11388 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 AL159987.1-201ENST00000347911 293 ntBASIC10.34□□□□□ -0.75
TOP2AP11388 BPHL-201ENST00000380368 797 ntTSL 5 BASIC10.34□□□□□ -0.75
TOP2AP11388 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC10.34□□□□□ -0.75
TOP2AP11388 AC231760.1-201ENST00000498002 260 ntBASIC10.34□□□□□ -0.75
TOP2AP11388 DCN-210ENST00000547568 823 ntTSL 3 BASIC10.34□□□□□ -0.75
TOP2AP11388 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC10.34□□□□□ -0.75
TOP2AP11388 SAMMSON-227ENST00000642114 1199 ntBASIC10.34□□□□□ -0.75
TOP2AP11388 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC10.34□□□□□ -0.75
TOP2AP11388 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
TOP2AP11388 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TOP2AP11388 CDY5P-201ENST00000411487 1580 ntBASIC10.34□□□□□ -0.75
TOP2AP11388 CDY9P-201ENST00000451397 1580 ntBASIC10.34□□□□□ -0.75
TOP2AP11388 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 FIGN-202ENST00000409634 746 ntTSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 MRE11P1-201ENST00000464884 2127 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC10.33□□□□□ -0.76
TOP2AP11388 OR4A46P-201ENST00000527255 933 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 AC007494.1-201ENST00000562293 760 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC10.33□□□□□ -0.76
TOP2AP11388 AC008536.1-201ENST00000602872 669 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 MIR6730-201ENST00000622213 67 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 AC104447.1-201ENST00000624214 2124 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms