Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CAPN1P07384 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CAPN1P07384 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CAPN1P07384 TMA16P2-201ENST00000413187 601 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 RPS17P17-201ENST00000419392 409 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 GAPDHP59-201ENST00000435908 267 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN1P07384 RPSAP40-201ENST00000442343 891 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.2□□□□□ -1.42
CAPN1P07384 AC092967.1-201ENST00000449016 481 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN1P07384 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN1P07384 AC122718.2-201ENST00000505325 591 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.2□□□□□ -1.42
CAPN1P07384 AC106800.3-201ENST00000511389 308 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN1P07384 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN1P07384 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN1P07384 RPL3P13-201ENST00000550415 216 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 SYPL1P2-201ENST00000582878 727 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN1P07384 AL008723.3-201ENST00000608926 449 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 MIR6721-201ENST00000617181 87 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 MIR6085-201ENST00000618314 110 ntBASIC6.2□□□□□ -1.42
CAPN1P07384 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN1P07384 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.2□□□□□ -1.42
CAPN1P07384 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN1P07384 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.19□□□□□ -1.42
CAPN1P07384 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.19□□□□□ -1.42
CAPN1P07384 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CAPN1P07384 OR11H13P-201ENST00000359695 979 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 RNA5SP485-201ENST00000365053 119 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 RNA5SP279-201ENST00000365513 117 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 SNORA11.3-201ENST00000408471 128 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 VN1R20P-201ENST00000425215 966 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.19□□□□□ -1.42
CAPN1P07384 GTF3AP6-201ENST00000432585 986 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.19□□□□□ -1.42
CAPN1P07384 COX4I1P2-201ENST00000447446 547 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AC093166.3-201ENST00000448785 303 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 RN7SL362P-201ENST00000494228 267 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AC091874.2-201ENST00000505889 720 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AC112484.3-201ENST00000505910 329 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 RNU6-964P-201ENST00000516524 69 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.19□□□□□ -1.42
CAPN1P07384 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.19□□□□□ -1.42
CAPN1P07384 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.19□□□□□ -1.42
CAPN1P07384 AC026898.1-201ENST00000586404 571 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 uc_338.31-201ENST00000615595 186 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 SNORA11.6-201ENST00000619030 128 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AL162377.2-201ENST00000624532 337 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AC018659.2-201ENST00000624690 715 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 AC022726.2-201ENST00000634673 547 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 CASC19-274ENST00000642018 970 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.19□□□□□ -1.42
CAPN1P07384 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.19□□□□□ -1.42
CAPN1P07384 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN1P07384 AC015799.1-201ENST00000622996 3122 ntBASIC6.19□□□□□ -1.42
CAPN1P07384 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN1P07384 DNM1P47-203ENST00000571780 12667 ntBASIC6.18□□□□□ -1.42
CAPN1P07384 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CAPN1P07384 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms