Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC023490.2-201ENST00000359859 470 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AL132875.1-201ENST00000403623 949 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 HMGN1P20-201ENST00000411849 300 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 UBE2V1P14-201ENST00000415815 558 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC066692.1-201ENST00000421721 457 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 KATNBL1P2-201ENST00000433311 835 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 IGHV1-14-201ENST00000523391 241 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC007956.1-201ENST00000555623 542 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC068768.2-201ENST00000602352 343 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC011458.1-201ENST00000604034 617 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC020765.1-201ENST00000604296 328 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC016542.1-201ENST00000608259 493 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC107905.1-201ENST00000616204 426 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC245014.3-201ENST00000618589 347 ntBASIC7.38□□□□□ -1.23
HLA-DOAP06340 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-DOAP06340 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-DOAP06340 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 GUCY1B2-204ENST00000531898 1979 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 NR1H5P-201ENST00000452683 1377 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 AL353626.3-201ENST00000413399 657 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 SEPT14P12-201ENST00000442280 560 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 AC011742.2-201ENST00000443818 352 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 AL513343.1-201ENST00000451818 792 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 AL121579.2-201ENST00000555466 590 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 LINC00556-201ENST00000569603 412 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 AP002345.2-201ENST00000609961 904 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 AC012254.5-201ENST00000623573 478 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 AC008937.3-201ENST00000606813 1700 ntBASIC7.37□□□□□ -1.23
HLA-DOAP06340 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-DOAP06340 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-DOAP06340 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 AC084782.1-201ENST00000564401 2465 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 OR6K3-202ENST00000368146 996 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 SUGT1P2-201ENST00000379452 992 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 RNU6-1176P-201ENST00000390955 107 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 AL445238.1-204ENST00000400311 463 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 IPPKP1-201ENST00000422501 768 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 AL356806.1-201ENST00000422524 916 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 RPS29P14-201ENST00000431518 171 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 RN7SL221P-201ENST00000466190 281 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-DOAP06340 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.36□□□□□ -1.23
HLA-DOAP06340 RNA5SP340-201ENST00000517132 107 ntBASIC7.36□□□□□ -1.23
HLA-DOAP06340 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms