Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC098828.1-201ENST00000436164 440 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC091862.1-201ENST00000438016 1100 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.35□□□□□ -1.23
PDGFAP04085 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC7.35□□□□□ -1.23
PDGFAP04085 RPSAP49-201ENST00000445182 886 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 RFC5P1-201ENST00000454419 874 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 RPS18P13-201ENST00000461260 454 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 MTCO3P38-201ENST00000468910 766 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 GAPDHP39-201ENST00000481866 979 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC122714.1-201ENST00000502510 459 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 AC010409.2-201ENST00000505780 478 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 AC006070.1-201ENST00000508151 193 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 PGBD4P4-201ENST00000509673 613 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.35□□□□□ -1.23
PDGFAP04085 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC7.35□□□□□ -1.23
PDGFAP04085 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.35□□□□□ -1.23
PDGFAP04085 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PDGFAP04085 NUTF2P2-201ENST00000551207 384 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AP005205.1-201ENST00000563503 508 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 MIR5192-201ENST00000579892 92 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 FAM106CP-201ENST00000582212 507 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.35□□□□□ -1.23
PDGFAP04085 EIF1P6-201ENST00000600054 334 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC024451.4-201ENST00000602578 752 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AL035417.2-201ENST00000603887 796 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 FXYD6P1-201ENST00000604857 285 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 BNIP3P4-201ENST00000604946 565 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 AC017083.3-201ENST00000609955 700 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC012409.3-201ENST00000611343 981 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC013476.2-201ENST00000614456 459 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC087893.2-201ENST00000623272 255 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.35□□□□□ -1.23
PDGFAP04085 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 FAM205BP-202ENST00000399773 4009 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.35□□□□□ -1.23
PDGFAP04085 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.35□□□□□ -1.23
PDGFAP04085 MRRFP1-201ENST00000435941 1675 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PDGFAP04085 RNU6-575P-201ENST00000411326 105 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 FNDC3CP-201ENST00000420795 1155 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.34□□□□□ -1.23
PDGFAP04085 RPSAP62-201ENST00000432596 833 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC241584.1-201ENST00000438469 1241 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AC005099.1-201ENST00000442083 610 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 AL591363.1-201ENST00000450091 483 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 RPS29P5-201ENST00000452777 171 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PDGFAP04085 RNA5SP269-201ENST00000459032 137 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC016489.1-201ENST00000461109 375 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms