Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.16□□□□□ -1.42
LDLRP01130 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.16□□□□□ -1.42
LDLRP01130 NF1P10-201ENST00000613227 742 ntBASIC6.16□□□□□ -1.42
LDLRP01130 U1.25-201ENST00000614085 162 ntBASIC6.16□□□□□ -1.42
LDLRP01130 U1.34-201ENST00000618578 162 ntBASIC6.16□□□□□ -1.42
LDLRP01130 U1.31-201ENST00000620022 160 ntBASIC6.16□□□□□ -1.42
LDLRP01130 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.16□□□□□ -1.42
LDLRP01130 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.16□□□□□ -1.42
LDLRP01130 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.16□□□□□ -1.42
LDLRP01130 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
LDLRP01130 NEK2P2-201ENST00000438441 1338 ntBASIC6.16□□□□□ -1.42
LDLRP01130 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.16□□□□□ -1.42
LDLRP01130 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
LDLRP01130 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
LDLRP01130 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LDLRP01130 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LDLRP01130 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.15□□□□□ -1.42
LDLRP01130 AC120036.2-201ENST00000509729 1474 ntBASIC6.15□□□□□ -1.42
LDLRP01130 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.15□□□□□ -1.42
LDLRP01130 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
LDLRP01130 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.15□□□□□ -1.42
LDLRP01130 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LDLRP01130 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LDLRP01130 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
LDLRP01130 MAPK10-261ENST00000641050 3109 ntBASIC6.15□□□□□ -1.42
LDLRP01130 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.15□□□□□ -1.42
LDLRP01130 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LDLRP01130 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LDLRP01130 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LDLRP01130 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 CYCSP52-201ENST00000422857 310 ntBASIC6.15□□□□□ -1.42
LDLRP01130 GAPDHP57-201ENST00000424400 585 ntBASIC6.15□□□□□ -1.42
LDLRP01130 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.15□□□□□ -1.42
LDLRP01130 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.15□□□□□ -1.42
LDLRP01130 GAPDHP59-201ENST00000435908 267 ntBASIC6.15□□□□□ -1.42
LDLRP01130 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.15□□□□□ -1.42
LDLRP01130 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 VN1R38P-201ENST00000450265 887 ntBASIC6.15□□□□□ -1.42
LDLRP01130 Z83838.1-202ENST00000456225 839 ntBASIC6.15□□□□□ -1.42
LDLRP01130 SLC25A51P1-201ENST00000468432 871 ntBASIC6.15□□□□□ -1.42
LDLRP01130 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.15□□□□□ -1.42
LDLRP01130 RN7SL654P-201ENST00000479178 292 ntBASIC6.15□□□□□ -1.42
LDLRP01130 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.15□□□□□ -1.42
LDLRP01130 AC021146.11-201ENST00000503319 491 ntBASIC6.15□□□□□ -1.42
LDLRP01130 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.15□□□□□ -1.42
LDLRP01130 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LDLRP01130 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.15□□□□□ -1.42
LDLRP01130 AC002310.3-201ENST00000569728 723 ntBASIC6.15□□□□□ -1.42
LDLRP01130 AC027243.2-201ENST00000602530 724 ntBASIC6.15□□□□□ -1.42
LDLRP01130 BUB1P1-201ENST00000603541 607 ntBASIC6.15□□□□□ -1.42
LDLRP01130 AL356986.1-201ENST00000604085 341 ntBASIC6.15□□□□□ -1.42
LDLRP01130 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.15□□□□□ -1.42
LDLRP01130 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.15□□□□□ -1.42
LDLRP01130 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
LDLRP01130 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
LDLRP01130 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LDLRP01130 AC005261.2-201ENST00000593427 4258 ntBASIC6.15□□□□□ -1.43
LDLRP01130 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LDLRP01130 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.15□□□□□ -1.43
LDLRP01130 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.15□□□□□ -1.43
LDLRP01130 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
LDLRP01130 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LDLRP01130 AL132656.3-201ENST00000606384 1595 ntBASIC6.14□□□□□ -1.43
LDLRP01130 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LDLRP01130 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LDLRP01130 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LDLRP01130 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
LDLRP01130 RN7SKP296-201ENST00000411185 341 ntBASIC6.14□□□□□ -1.43
LDLRP01130 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.14□□□□□ -1.43
LDLRP01130 RPS7P12-201ENST00000422385 582 ntBASIC6.14□□□□□ -1.43
LDLRP01130 GPN3P1-201ENST00000423883 535 ntBASIC6.14□□□□□ -1.43
LDLRP01130 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.14□□□□□ -1.43
LDLRP01130 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.14□□□□□ -1.43
LDLRP01130 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 RPS29P14-201ENST00000431518 171 ntBASIC6.14□□□□□ -1.43
LDLRP01130 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 AC069154.1-201ENST00000432914 542 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms