Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NKX2-2O95096 AC092601.1-201ENST00000444526 383 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 MORF4-201ENST00000447135 971 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 RPS18P1-201ENST00000447840 458 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.85□□□□□ -1.47
NKX2-2O95096 AC103563.5-201ENST00000455643 364 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 RBMY2HP-201ENST00000457961 720 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 RN7SL39P-201ENST00000462264 297 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.85□□□□□ -1.47
NKX2-2O95096 RN7SL221P-201ENST00000466190 281 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 RPL12P31-201ENST00000478433 450 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NKX2-2O95096 SNRPCP11-201ENST00000492453 205 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 NACAP5-201ENST00000509863 636 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 SEC11B-201ENST00000518383 499 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX2-2O95096 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX2-2O95096 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX2-2O95096 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX2-2O95096 AC084036.1-201ENST00000609190 508 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AC006924.1-201ENST00000610750 559 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AL137246.2-201ENST00000613439 662 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 OR7E91P-202ENST00000642062 1198 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX2-2O95096 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 Z93929.1-201ENST00000418200 1475 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX2-2O95096 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-2O95096 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC011504.1-201ENST00000623331 4103 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX2-2O95096 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 SNORA64.3-201ENST00000365647 134 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 MIR433-201ENST00000384837 93 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 RAB5CP1-201ENST00000395972 580 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.84□□□□□ -1.47
NKX2-2O95096 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 TMA16P2-201ENST00000413187 601 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 TRIM60P17-201ENST00000415181 719 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 AC017078.1-201ENST00000416146 368 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX2-2O95096 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-2O95096 ARMC4P1-201ENST00000438905 707 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 MTCO3P43-201ENST00000440974 771 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 AC245291.3-201ENST00000443400 292 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 RPS15AP29-201ENST00000445539 400 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 RPS27AP3-201ENST00000453803 454 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 CEACAMP11-201ENST00000455211 583 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 RN7SL326P-201ENST00000477493 296 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 KHDC1P1-201ENST00000511053 508 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC138517.1-201ENST00000515724 568 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 RNU6-760P-201ENST00000516078 97 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 CYCSP25-201ENST00000525280 316 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX2-2O95096 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC063977.7-201ENST00000594454 337 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 AC089999.3-201ENST00000622440 577 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 MAPK10-350ENST00000641777 965 ntBASIC5.84□□□□□ -1.47
NKX2-2O95096 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms