Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.83□□□□□ -1
RNF40O75150 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 CR383658.2-201ENST00000547576 1525 ntBASIC8.83□□□□□ -1
RNF40O75150 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
RNF40O75150 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 AC009166.2-201ENST00000624410 2833 ntBASIC8.83□□□□□ -1
RNF40O75150 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.83□□□□□ -1
RNF40O75150 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
RNF40O75150 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.83□□□□□ -1
RNF40O75150 AF131215.2-201ENST00000531549 1710 ntBASIC8.83□□□□□ -1
RNF40O75150 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.82□□□□□ -1
RNF40O75150 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.82□□□□□ -1
RNF40O75150 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC8.82□□□□□ -1
RNF40O75150 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
RNF40O75150 FMO9P-202ENST00000488458 1535 ntBASIC8.82□□□□□ -1
RNF40O75150 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.82□□□□□ -1
RNF40O75150 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.82□□□□□ -1
RNF40O75150 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.82□□□□□ -1
RNF40O75150 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
RNF40O75150 SNORA4.1-201ENST00000364263 144 ntBASIC8.82□□□□□ -1
RNF40O75150 TRAV35-201ENST00000390462 330 ntBASIC8.82□□□□□ -1
RNF40O75150 HMGB3P23-201ENST00000414981 585 ntBASIC8.82□□□□□ -1
RNF40O75150 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC8.82□□□□□ -1
RNF40O75150 AC019050.1-201ENST00000418508 492 ntBASIC8.82□□□□□ -1
RNF40O75150 AC111200.2-201ENST00000418877 505 ntBASIC8.82□□□□□ -1
RNF40O75150 AC007435.1-201ENST00000421086 415 ntBASIC8.82□□□□□ -1
RNF40O75150 GTF2IP23-201ENST00000423746 351 ntBASIC8.82□□□□□ -1
RNF40O75150 AL009174.1-201ENST00000426577 416 ntBASIC8.82□□□□□ -1
RNF40O75150 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 AC022364.2-201ENST00000457963 554 ntBASIC8.82□□□□□ -1
RNF40O75150 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC8.82□□□□□ -1
RNF40O75150 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC8.82□□□□□ -1
RNF40O75150 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC8.82□□□□□ -1
RNF40O75150 AC013701.1-201ENST00000522657 465 ntBASIC8.82□□□□□ -1
RNF40O75150 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC8.82□□□□□ -1
RNF40O75150 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.82□□□□□ -1
RNF40O75150 AC020661.2-201ENST00000560114 134 ntBASIC8.82□□□□□ -1
RNF40O75150 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 AC008870.2-201ENST00000568262 1024 ntBASIC8.82□□□□□ -1
RNF40O75150 AC034268.2-201ENST00000571784 482 ntBASIC8.82□□□□□ -1
RNF40O75150 MIR3913-1-201ENST00000577744 102 ntBASIC8.82□□□□□ -1
RNF40O75150 AC096708.1-201ENST00000584419 658 ntBASIC8.82□□□□□ -1
RNF40O75150 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 AL442067.1-201ENST00000613261 223 ntBASIC8.82□□□□□ -1
RNF40O75150 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC8.82□□□□□ -1
RNF40O75150 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.82□□□□□ -1
RNF40O75150 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
RNF40O75150 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 OR2A20P-201ENST00000479887 2913 ntBASIC8.82□□□□□ -1
RNF40O75150 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC8.82□□□□□ -1
RNF40O75150 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.82□□□□□ -1
RNF40O75150 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 AL031123.3-201ENST00000623345 1837 ntBASIC8.82□□□□□ -1
RNF40O75150 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
RNF40O75150 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
RNF40O75150 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
RNF40O75150 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
RNF40O75150 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RNF40O75150 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RNF40O75150 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
RNF40O75150 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RNF40O75150 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.81□□□□□ -1
RNF40O75150 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.81□□□□□ -1
RNF40O75150 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.81□□□□□ -1
RNF40O75150 RNA5SP263-201ENST00000363376 128 ntBASIC8.81□□□□□ -1
RNF40O75150 Y_RNA.302-201ENST00000364997 102 ntBASIC8.81□□□□□ -1
RNF40O75150 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
RNF40O75150 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC8.81□□□□□ -1
RNF40O75150 RACK1-201ENST00000376817 965 ntTSL 5 BASIC8.81□□□□□ -1
RNF40O75150 CNN2P7-201ENST00000400583 932 ntBASIC8.81□□□□□ -1
RNF40O75150 RPSAP42-201ENST00000403415 878 ntBASIC8.81□□□□□ -1
RNF40O75150 ANXA2P3-201ENST00000404883 1008 ntBASIC8.81□□□□□ -1
RNF40O75150 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.81□□□□□ -1
RNF40O75150 RN7SKP127-201ENST00000410443 354 ntBASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms