Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX4O60224 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SSX4O60224 NPM1P38-201ENST00000403835 865 ntBASIC5.8□□□□□ -1.48
SSX4O60224 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SSX4O60224 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX4O60224 SETP9-201ENST00000423837 832 ntBASIC5.8□□□□□ -1.48
SSX4O60224 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX4O60224 AL590399.4-201ENST00000436561 601 ntBASIC5.8□□□□□ -1.48
SSX4O60224 CRYGGP-201ENST00000443337 145 ntBASIC5.8□□□□□ -1.48
SSX4O60224 SNRPBP1-201ENST00000443634 282 ntBASIC5.8□□□□□ -1.48
SSX4O60224 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 TIMM8BP2-201ENST00000445940 251 ntBASIC5.8□□□□□ -1.48
SSX4O60224 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX4O60224 AL356390.1-201ENST00000455684 397 ntBASIC5.8□□□□□ -1.48
SSX4O60224 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX4O60224 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.8□□□□□ -1.48
SSX4O60224 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 RNA5SP473-201ENST00000516402 125 ntBASIC5.8□□□□□ -1.48
SSX4O60224 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX4O60224 OR4A41P-201ENST00000533053 928 ntBASIC5.8□□□□□ -1.48
SSX4O60224 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX4O60224 AC121758.1-202ENST00000556917 658 ntBASIC5.8□□□□□ -1.48
SSX4O60224 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 PPIAP14-201ENST00000577627 496 ntBASIC5.8□□□□□ -1.48
SSX4O60224 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX4O60224 AL356752.1-201ENST00000615844 593 ntBASIC5.8□□□□□ -1.48
SSX4O60224 AC005393.1-201ENST00000617916 584 ntBASIC5.8□□□□□ -1.48
SSX4O60224 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX4O60224 DNM1P47-203ENST00000571780 12667 ntBASIC5.8□□□□□ -1.48
SSX4O60224 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX4O60224 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX4O60224 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX4O60224 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.8□□□□□ -1.48
SSX4O60224 AC010624.4-201ENST00000597606 1351 ntBASIC5.8□□□□□ -1.48
SSX4O60224 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX4O60224 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SSX4O60224 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 RNA5SP188-201ENST00000362916 129 ntBASIC5.79□□□□□ -1.48
SSX4O60224 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX4O60224 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 RPSAP32-201ENST00000432681 526 ntBASIC5.79□□□□□ -1.48
SSX4O60224 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 AC128677.1-201ENST00000436016 442 ntBASIC5.79□□□□□ -1.48
SSX4O60224 GAPDHP20-201ENST00000444107 1007 ntBASIC5.79□□□□□ -1.48
SSX4O60224 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 NMNAT1P3-201ENST00000457517 888 ntBASIC5.79□□□□□ -1.48
SSX4O60224 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 RN7SL568P-201ENST00000493069 298 ntBASIC5.79□□□□□ -1.48
SSX4O60224 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 SNX18P23-201ENST00000510867 677 ntBASIC5.79□□□□□ -1.48
SSX4O60224 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX4O60224 MTND2P7-201ENST00000521337 640 ntBASIC5.79□□□□□ -1.48
SSX4O60224 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.79□□□□□ -1.48
SSX4O60224 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX4O60224 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.79□□□□□ -1.48
SSX4O60224 AP003115.1-201ENST00000569849 463 ntBASIC5.79□□□□□ -1.48
SSX4O60224 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 AC012368.3-201ENST00000604190 219 ntBASIC5.79□□□□□ -1.48
SSX4O60224 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX4O60224 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 AC068726.1-201ENST00000610993 341 ntBASIC5.79□□□□□ -1.48
SSX4O60224 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SSX4O60224 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX4O60224 AL512329.1-201ENST00000404600 1592 ntBASIC5.79□□□□□ -1.48
SSX4O60224 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 AL121839.2-201ENST00000565058 6943 ntBASIC5.79□□□□□ -1.48
SSX4O60224 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms