Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL020997.1-201ENST00000446554 349 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 RPS7P10-201ENST00000464254 603 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 RNU6-415P-201ENST00000516252 97 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AL162632.2-201ENST00000553933 399 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC092718.4-201ENST00000566639 716 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC009237.12-201ENST00000604755 742 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC008833.1-201ENST00000611633 691 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AL138960.1-201ENST00000613838 513 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC020763.5-201ENST00000623298 430 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AC018692.2-201ENST00000624130 348 ntBASIC6.65□□□□□ -1.34
DKK3Q9UBP4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
DKK3Q9UBP4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
DKK3Q9UBP4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 SNORA72.3-201ENST00000365074 132 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 KIF4CP-201ENST00000422742 1279 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 MTCO1P57-201ENST00000432182 261 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 SEPT14P12-201ENST00000442280 560 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC245291.3-201ENST00000443400 292 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 RPL5P10-201ENST00000445207 894 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AL353718.1-201ENST00000451028 517 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 BZW1P1-201ENST00000454901 1240 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 RBMY2HP-201ENST00000457961 720 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 SUMO2P4-201ENST00000504193 276 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 NPM1P21-201ENST00000513394 762 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 MTND5P21-201ENST00000531961 522 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC009712.1-201ENST00000564938 316 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC025283.1-201ENST00000572039 734 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC020915.5-201ENST00000596836 964 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AL359091.2-201ENST00000609303 556 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC114546.4-201ENST00000624413 369 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC073488.9-201ENST00000631601 754 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC132825.8-201ENST00000640783 297 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 API5P1-201ENST00000424316 1510 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AC010168.2-201ENST00000562691 5428 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
DKK3Q9UBP4 SMG1P5-202ENST00000529428 4219 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 SMG1P2-201ENST00000566127 4221 ntBASIC6.64□□□□□ -1.35
DKK3Q9UBP4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms