Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AL353743.3-201ENST00000442109 1468 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 SNORD16-201ENST00000362803 99 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 SMC4P1-201ENST00000414479 527 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AL157884.1-201ENST00000424561 454 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AL354707.3-201ENST00000427308 331 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 RPSAP65-201ENST00000429660 595 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 IGLV3-4-201ENST00000432300 244 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 GTF2IP14-201ENST00000441415 586 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AL358876.1-201ENST00000453364 1075 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 Z83838.1-202ENST00000456225 839 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AC009963.3-201ENST00000458090 486 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 RPL17P2-201ENST00000491913 451 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AC073046.2-201ENST00000604756 527 ntBASIC6.31□□□□□ -1.4
SPASTQ9UBP0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.31□□□□□ -1.4
SPASTQ9UBP0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 SAGE3P-201ENST00000619800 1635 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 RNU4-64P-201ENST00000410795 131 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AMYP1-201ENST00000440059 1023 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 HMGN1P2-201ENST00000445197 310 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC010240.2-201ENST00000445363 1205 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC144530.1-201ENST00000452862 555 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 RN7SL643P-201ENST00000471845 291 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC022415.1-202ENST00000486612 523 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 TPRX1P1-201ENST00000557620 319 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC090286.3-201ENST00000573133 187 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC005726.4-201ENST00000582858 458 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AL157899.1-201ENST00000604110 936 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC091193.1-201ENST00000604640 448 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AL359742.1-201ENST00000622497 540 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AC022400.9-201ENST00000623633 273 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 CDY11P-201ENST00000447168 1651 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SPASTQ9UBP0 AL355377.1-201ENST00000621125 1653 ntBASIC6.3□□□□□ -1.4
SPASTQ9UBP0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 SNX18P3-202ENST00000565670 1750 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 CCAT2-201ENST00000630920 1752 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC079753.1-201ENST00000623243 3868 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms