Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC091133.5-201ENST00000603088 301 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AL163051.2-201ENST00000618976 735 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC097460.3-201ENST00000623099 442 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 PPBPP2-201ENST00000513150 1362 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 MROH3P-201ENST00000435735 2676 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC107021.2-201ENST00000567714 2095 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 RNU1-55P-201ENST00000365510 158 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 SNORA64.3-201ENST00000365647 134 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AL359694.1-201ENST00000403247 604 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AL353626.3-201ENST00000413399 657 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 RPL7AP51-201ENST00000422016 760 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 DUTP4-201ENST00000424782 475 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC239367.3-201ENST00000428996 814 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 MARK2P8-201ENST00000476069 952 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 PABPC1P1-201ENST00000506347 591 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 HMGN1P15-201ENST00000513870 295 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 RNA5SP473-201ENST00000516402 125 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AP001000.1-201ENST00000526843 742 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AL445383.1-201ENST00000554689 874 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC092718.4-201ENST00000566639 716 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC011500.1-201ENST00000601963 469 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC144521.1-201ENST00000607148 956 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC005899.7-201ENST00000618199 588 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 MIR6823-201ENST00000622118 61 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 AL354702.2-202ENST00000641481 890 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 AC007114.2-201ENST00000576014 4281 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
LRFN1Q9P244 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LRFN1Q9P244 SPATA2P1-201ENST00000431223 2055 ntBASIC6.18□□□□□ -1.42
LRFN1Q9P244 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.17□□□□□ -1.42
LRFN1Q9P244 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRFN1Q9P244 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.17□□□□□ -1.42
LRFN1Q9P244 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
LRFN1Q9P244 AC016251.2-201ENST00000623393 3089 ntBASIC6.17□□□□□ -1.42
LRFN1Q9P244 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRFN1Q9P244 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRFN1Q9P244 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRFN1Q9P244 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms